RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 CLEC6AQ6EIG7 209 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 NOXRED1Q6NXP6 359 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 KRT74Q7RTS7 529 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 SLCO6A1Q86UG4 719 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 IQCHQ86VS3 1027 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 ZNF761Q86XN6 746 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-218ENST00000545889 HIPK1Q86Z02 1210 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 NXPE1Q8N323 547 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 SGCDQ92629 289 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 SLC39A13Q96H72 371 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 FRG2BQ96QU4 278 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 NPIPA1Q9UND3 350 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 TRIM64A6NGJ6 449 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 AP2A2O94973 939 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 MT-ND5P03915 603 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 JUNP05412 331 aaKnown RBP8.27□□□□□ -1.09
CLIP1-218ENST00000545889 COX4I1P13073 169 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 CD6P30203 668 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 SOX9P48436 509 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 RAB14P61106 215 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF33AQ06730 810 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 PUM1Q14671 1186 aaKnown RBP eCLIP8.27□□□□□ -1.095e-6■□□□□ 10.2
CLIP1-218ENST00000545889 MLF2Q15773 248 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-218ENST00000545889 CDKN3Q16667 212 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 DPY19L1Q2PZI1 675 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 PTCHD3Q3KNS1 767 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 DEFB134Q4QY38 66 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 MTX3Q5HYI7 312 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 PPM1JQ5JR12 505 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 RAET1LQ5VY80 246 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 FSTL4Q6MZW2 842 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 NCEH1Q6PIU2 408 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 TMPRSS11AQ6ZMR5 421 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 AMIGO1Q86WK6 493 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 LIX1LQ8IVB5 337 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 SLC38A6Q8IZM9 456 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 CSNK1A1LQ8N752 337 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 PIH1D2Q8WWB5 315 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 SLC5A11Q8WWX8 675 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 TMEM234Q8WY98 164 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 NT5C3BQ969T7 300 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 TRMT2BQ96GJ1 504 aaKnown RBP8.27□□□□□ -1.09
CLIP1-218ENST00000545889 IFT27Q9BW83 186 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 PHF7Q9BWX1 381 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-218ENST00000545889 WDR55Q9H6Y2 383 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-218ENST00000545889 NUMBLQ9Y6R0 609 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 ARID2Q68CP9 1835 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 C12orf71A8MTZ7 269 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 CXorf49A8MYA2 514 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-218ENST00000545889 MEN1O00255 615 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 NME6O75414 186 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-218ENST00000545889 SMIM18P0DKX4 95 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 HRH2P25021 359 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 MPSTP25325 297 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 TTKP33981 857 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 FOLR3P41439 243 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 CHAF1BQ13112 559 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 NSDHLQ15738 373 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 SYT16Q17RD7 645 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 ZBED5Q49AG3 693 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 TCTE1Q5JU00 501 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 SMYD5Q6GMV2 418 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 MZT2AQ6P582 158 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 UNQ6126/PRO20091Q6UXV3 157 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 Q6ZSR6 202 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 GPAT4Q86UL3 456 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 NLGN4XQ8N0W4 816 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 C1orf52Q8N6N3 182 aaKnown RBP8.27□□□□□ -1.09
CLIP1-218ENST00000545889 DIO2Q92813 273 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 RCN3Q96D15 328 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 OR1F2PQ96R84 312 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 ASPNQ9BXN1 380 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF395Q9H8N7 513 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-218ENST00000545889 GPN2Q9H9Y4 310 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-218ENST00000545889 CENPBD1B2RD01 187 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 SEC14L5O43304 696 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 TPST2O60704 377 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 C8orf89P0DMQ9 161 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 PFKLP17858 780 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 SLC1A2P43004 574 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 CLCN4P51793 760 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 MRPS21P82921 87 aaKnown RBP8.27□□□□□ -1.09
CLIP1-218ENST00000545889 PPP2R2BQ00005 443 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 NIPAL4Q0D2K0 466 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 MANEAQ5SRI9 462 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 TMPRSS9Q7Z410 1059 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 LIMS2Q7Z4I7 341 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 CAND1Q86VP6 1230 aaKnown RBP8.27□□□□□ -1.09
CLIP1-218ENST00000545889 THOC6Q86W42 341 aaKnown RBP8.27□□□□□ -1.09
CLIP1-218ENST00000545889 ARHGAP12Q8IWW6 846 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 TP53INP1Q96A56 240 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 CCDC120Q96HB5 630 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 COL21A1Q96P44 957 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 FCRL4Q96PJ5 515 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 PKMYT1Q99640 499 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 OR51B5Q9H339 312 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 MAGEL2Q9UJ55 1249 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 OR1A2Q9Y585 309 aa8.27□□□□□ -1.09
CLIP1-218ENST00000545889 TTLL8A6PVC2 850 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 A8MVJ9 347 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms