RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 BMP10O95393 424 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 CCNYL3P0C7X3 344 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 EPHA3P29320 983 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 DLSTP36957 453 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 SLAMF1Q13291 335 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 C18orf63Q68DL7 685 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 GALNT18Q6P9A2 607 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 NUDT13Q86X67 352 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 IL22RA1Q8N6P7 574 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 FAM47BQ8NA70 645 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 SRFBP1Q8NEF9 429 aaKnown RBP15.37■□□□□ 0.05
LIMS2-217ENST00000545738 FCRL1Q96LA6 429 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 EBF4Q9BQW3 602 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 SLC26A1Q9H2B4 701 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 SOX17Q9H6I2 414 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-217ENST00000545738 AKTIPQ9H8T0 292 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 LRTM1Q9HBL6 345 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 FBXW2Q9UKT8 454 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 CDC14AQ9UNH5 594 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 RAXQ9Y2V3 346 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 CLDN16Q9Y5I7 305 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 USH1CQ9Y6N9 552 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 GOLGA8QA0A0J9YX86 632 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 GOLGA8OA6NCC3 632 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 GOLGA8NF8WBI6 632 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 TGFBR3LH3BV60 316 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 RGS14O43566 566 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 B3GALT2O43825 422 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 UMODP07911 640 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 ZGLP1P0C6A0 271 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 ALOX15P16050 662 aaPredicted RBP15.36■□□□□ 0.05
LIMS2-217ENST00000545738 AGXTP21549 392 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 TIA1P31483 386 aaKnown RBP eCLIP15.36■□□□□ 0.05
LIMS2-217ENST00000545738 TSFMP43897 325 aaKnown RBP15.36■□□□□ 0.05
LIMS2-217ENST00000545738 ARFIP1P53367 373 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 RPL38P63173 70 aaKnown RBP15.36■□□□□ 0.05
LIMS2-217ENST00000545738 KLC1Q07866 573 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 ACSM2AQ08AH3 577 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 SF3A3Q12874 501 aaKnown RBP eCLIP15.36■□□□□ 0.05
LIMS2-217ENST00000545738 DNASE1L3Q13609 305 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 C6orf136Q5SQH8 315 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 ACSM2BQ68CK6 577 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 LARP4Q71RC2 724 aaKnown RBP eCLIP15.36■□□□□ 0.05
LIMS2-217ENST00000545738 LRRC34Q8IZ02 419 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 RFWD2Q8NHY2 731 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 NUDT8Q8WV74 236 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 MAELQ96JY0 434 aaKnown RBP15.36■□□□□ 0.05
LIMS2-217ENST00000545738 EGLN2Q96KS0 407 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 OR52B2Q96RD2 323 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 C1orf50Q9BV19 199 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 YIPF2Q9BWQ6 316 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 COPS7BQ9H9Q2 264 aaPredicted RBP15.36■□□□□ 0.05
LIMS2-217ENST00000545738 C1orf109Q9NX04 203 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 SIRT5Q9NXA8 310 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 ZNF282Q9UDV7 671 aaPredicted RBP15.36■□□□□ 0.05
LIMS2-217ENST00000545738 BSNQ9UPA5 3926 aa15.36■□□□□ 0.05
LIMS2-217ENST00000545738 SPENQ96T58 3664 aaKnown RBP15.36■□□□□ 0.05
LIMS2-217ENST00000545738 A0A1W2PR48 441 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 A0A1W2PS29 197 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 PCDH7O60245 1069 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 SEC22BO75396 215 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 RECKO95980 971 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 EIF2S3P41091 472 aaKnown RBP15.35■□□□□ 0.05
LIMS2-217ENST00000545738 TGM3Q08188 693 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 IL10RAQ13651 578 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 SPIN4Q56A73 249 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.35■□□□□ 0.05
LIMS2-217ENST00000545738 KCNE4Q8WWG9 221 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 FKBP10Q96AY3 582 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 TUBGCP3Q96CW5 907 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 CENPKQ9BS16 269 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 TGIF2Q9GZN2 237 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 ACTL8Q9H568 366 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 KCNK13Q9HB14 408 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 EXO1Q9UQ84 846 aaKnown RBP15.35■□□□□ 0.05
LIMS2-217ENST00000545738 SSUH2Q9Y2M2 353 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 PTPRQQ9UMZ3 2332 aa15.35■□□□□ 0.05
LIMS2-217ENST00000545738 PROM1O43490 865 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 ALDOCP09972 364 aaKnown RBP15.34■□□□□ 0.05
LIMS2-217ENST00000545738 FAM58BPP0C7Q3 252 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 SDC1P18827 310 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 SEC24CP53992 1094 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 BTG2P78543 158 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 CCNYL2Q5T2Q4 361 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 NOXRED1Q6NXP6 359 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 EPGNQ6UW88 154 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 PROSER1Q86XN7 944 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 ZNF248Q8NDW4 579 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 TM4SF18Q96CE8 201 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 NPLQ9BXD5 320 aaPredicted RBP15.34■□□□□ 0.05
LIMS2-217ENST00000545738 VN1R1Q9GZP7 353 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 LYRM4Q9HD34 91 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 MKKSQ9NPJ1 570 aaPredicted RBP15.34■□□□□ 0.05
LIMS2-217ENST00000545738 WDR70Q9NW82 654 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 C5AR2Q9P296 337 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 HEY2Q9UBP5 337 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 BAIAP2L1Q9UHR4 511 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 MCM8Q9UJA3 840 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 ADAM29Q9UKF5 820 aa15.34■□□□□ 0.05
LIMS2-217ENST00000545738 TCFL5Q9UL49 500 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms