RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 VN1R2Q8NFZ6 395 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 WDR36Q8NI36 951 aaKnown RBP15.09■□□□□ 0.01
LDLR-204ENST00000545707 GEMIN6Q8WXD5 167 aaKnown RBP15.09■□□□□ 0.01
LDLR-204ENST00000545707 TIFAQ96CG3 184 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 ZNF689Q96CS4 500 aaPredicted RBP15.09■□□□□ 0.01
LDLR-204ENST00000545707 MRGPRX3Q96LB0 322 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 NXF2Q9GZY0 626 aaKnown RBP15.09■□□□□ 0.01
LDLR-204ENST00000545707 TMEM38AQ9H6F2 299 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 CXorf36Q9H7Y0 433 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 SIAEQ9HAT2 523 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 ANKHQ9HCJ1 492 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 THSD1Q9NS62 852 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 ERVK13-1Q9NX77 482 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 TSC22D4Q9Y3Q8 395 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 DYRK1BQ9Y463 629 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 WNT6Q9Y6F9 365 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 HELZP42694 1942 aaKnown RBP15.09■□□□□ 0.01
LDLR-204ENST00000545707 MYO7AQ13402 2215 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 NINQ8N4C6 2090 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 ARHGAP33O14559 1287 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 ITGA2P17301 1181 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 SYN1P17600 705 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 CBLP22681 906 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 PIK3CBP42338 1070 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 LIMS1P48059 325 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 LIMK1P53667 647 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 CDC42P60953 191 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 TAP2Q03519 686 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 TEAD2Q15562 447 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 DEPDC1Q5TB30 811 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 FRMPD2BQ6IN97 320 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 PNCKQ6P2M8 343 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 GDPD3Q7L5L3 318 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 TRMT11Q7Z4G4 463 aaKnown RBP15.08■□□□□ 0.01
LDLR-204ENST00000545707 RBM45Q8IUH3 476 aaKnown RBP15.08■□□□□ 0.01
LDLR-204ENST00000545707 TAGAPQ8N103 731 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 OXR1Q8N573 874 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 CELF2-AS1Q8N7Q2 184 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 RAB8BQ92930 207 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 WFDC6Q9BQY6 131 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 CPNE5Q9HCH3 593 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 ASAH2Q9NR71 780 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 CLEC2DQ9UHP7 191 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 ENPP4Q9Y6X5 453 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 CHD7Q9P2D1 2997 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 UNC80Q8N2C7 3258 aa15.08■□□□□ 0.01
LDLR-204ENST00000545707 ISPDA4D126 451 aa15.08■□□□□ 0
LDLR-204ENST00000545707 KPNA3O00505 521 aaPredicted RBP15.08■□□□□ 0
LDLR-204ENST00000545707 COQ9O75208 318 aa15.08■□□□□ 0
LDLR-204ENST00000545707 ENTPD6O75354 484 aa15.08■□□□□ 0
LDLR-204ENST00000545707 NR4A2P43354 598 aa15.08■□□□□ 0
LDLR-204ENST00000545707 RBBP4Q09028 425 aa15.08■□□□□ 0
LDLR-204ENST00000545707 PDE7AQ13946 482 aa15.08■□□□□ 0
LDLR-204ENST00000545707 SSX1Q16384 188 aa15.08■□□□□ 0
LDLR-204ENST00000545707 CRB2Q5IJ48 1285 aa15.08■□□□□ 0
LDLR-204ENST00000545707 VANGL1Q8TAA9 524 aaPredicted RBP15.08■□□□□ 0
LDLR-204ENST00000545707 EXOSC4Q9NPD3 245 aaKnown RBP15.08■□□□□ 0
LDLR-204ENST00000545707 SPHK2Q9NRA0 654 aa15.08■□□□□ 0
LDLR-204ENST00000545707 TAAR2Q9P1P5 351 aa15.08■□□□□ 0
LDLR-204ENST00000545707 FTSJ1Q9UET6 329 aa15.08■□□□□ 0
LDLR-204ENST00000545707 PCDHGB6Q9Y5F9 930 aa15.08■□□□□ 0
LDLR-204ENST00000545707 KMOO15229 486 aa15.07■□□□□ 0
LDLR-204ENST00000545707 SEMA7AO75326 666 aa15.07■□□□□ 0
LDLR-204ENST00000545707 GPX5O75715 221 aa15.07■□□□□ 0
LDLR-204ENST00000545707 CYP7B1O75881 506 aa15.07■□□□□ 0
LDLR-204ENST00000545707 OXSR1O95747 527 aaPredicted RBP15.07■□□□□ 0
LDLR-204ENST00000545707 OPRD1P41143 372 aa15.07■□□□□ 0
LDLR-204ENST00000545707 SOX3P41225 446 aa15.07■□□□□ 0
LDLR-204ENST00000545707 CRISP1P54107 249 aa15.07■□□□□ 0
LDLR-204ENST00000545707 PCBP3P57721 371 aaKnown RBP15.07■□□□□ 0
LDLR-204ENST00000545707 SEC23BQ15437 767 aa15.07■□□□□ 0
LDLR-204ENST00000545707 FBXO43Q4G163 708 aa15.07■□□□□ 0
LDLR-204ENST00000545707 ZNF362Q5T0B9 420 aaPredicted RBP15.07■□□□□ 0
LDLR-204ENST00000545707 CCBE1Q6UXH8 406 aaPredicted RBP15.07■□□□□ 0
LDLR-204ENST00000545707 CEACAM20Q6UY09 585 aa15.07■□□□□ 0
LDLR-204ENST00000545707 CCDC80Q76M96 950 aa15.07■□□□□ 0
LDLR-204ENST00000545707 PARS2Q7L3T8 475 aaKnown RBP15.07■□□□□ 0
LDLR-204ENST00000545707 NLRP8Q86W28 1048 aa15.07■□□□□ 0
LDLR-204ENST00000545707 ATCAYQ86WG3 371 aa15.07■□□□□ 0
LDLR-204ENST00000545707 KREMEN2Q8NCW0 462 aa15.07■□□□□ 0
LDLR-204ENST00000545707 CNPPD1Q9BV87 410 aa15.07■□□□□ 0
LDLR-204ENST00000545707 SLAMF7Q9NQ25 335 aa15.07■□□□□ 0
LDLR-204ENST00000545707 MIEF1Q9NQG6 463 aa15.07■□□□□ 0
LDLR-204ENST00000545707 DNAJC27Q9NZQ0 273 aa15.07■□□□□ 0
LDLR-204ENST00000545707 IL36AQ9UHA7 158 aa15.07■□□□□ 0
LDLR-204ENST00000545707 CCDC88CQ9P219 2028 aa15.07■□□□□ 0
LDLR-204ENST00000545707 SAGE2PA6NJ88 616 aa15.07■□□□□ 0
LDLR-204ENST00000545707 AGRPO00253 132 aa15.07■□□□□ 0
LDLR-204ENST00000545707 WWP2O00308 870 aa15.07■□□□□ 0
LDLR-204ENST00000545707 IFNW1P05000 195 aa15.07■□□□□ 0
LDLR-204ENST00000545707 BCHEP06276 602 aa15.07■□□□□ 0
LDLR-204ENST00000545707 ARAFP10398 606 aa15.07■□□□□ 0
LDLR-204ENST00000545707 ALDH9A1P49189 494 aa15.07■□□□□ 0
LDLR-204ENST00000545707 TGM4P49221 684 aa15.07■□□□□ 0
LDLR-204ENST00000545707 PCDH1Q08174 1060 aa15.07■□□□□ 0
LDLR-204ENST00000545707 ZNF630Q2M218 657 aaPredicted RBP15.07■□□□□ 0
LDLR-204ENST00000545707 TRIM60Q495X7 471 aa15.07■□□□□ 0
LDLR-204ENST00000545707 ZNF805Q5CZA5 627 aa15.07■□□□□ 0
LDLR-204ENST00000545707 TUBA3EQ6PEY2 450 aa15.07■□□□□ 0
LDLR-204ENST00000545707 VN1R5Q7Z5H4 357 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms