RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 LMNTD2Q8IXW0 634 aa13.61□□□□□ -0.23
RTN3-214ENST00000545432 ULK2Q8IYT8 1036 aa13.61□□□□□ -0.23
RTN3-214ENST00000545432 FBXW8Q8N3Y1 598 aa13.61□□□□□ -0.23
RTN3-214ENST00000545432 NAXEQ8NCW5 288 aa13.61□□□□□ -0.23
RTN3-214ENST00000545432 NUDT8Q8WV74 236 aa13.61□□□□□ -0.23
RTN3-214ENST00000545432 EEF1AKMT1Q8WVE0 214 aa13.61□□□□□ -0.23
RTN3-214ENST00000545432 NPLQ9BXD5 320 aaPredicted RBP13.61□□□□□ -0.23
RTN3-214ENST00000545432 LIN28AQ9H9Z2 209 aaKnown RBP13.61□□□□□ -0.23
RTN3-214ENST00000545432 ADAP2Q9NPF8 381 aa13.61□□□□□ -0.23
RTN3-214ENST00000545432 SEMA4BQ9NPR2 832 aaPredicted RBP13.61□□□□□ -0.23
RTN3-214ENST00000545432 QPCTLQ9NXS2 382 aa13.61□□□□□ -0.23
RTN3-214ENST00000545432 ATG4BQ9Y4P1 393 aa13.61□□□□□ -0.23
RTN3-214ENST00000545432 TRGV5A0A0B4J1U4 118 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 PPP2R1BP30154 601 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 NKX6-1P78426 367 aaPredicted RBP13.6□□□□□ -0.23
RTN3-214ENST00000545432 REEP5Q00765 189 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 SORDQ00796 357 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 DHX9Q08211 1270 aaKnown RBP13.6□□□□□ -0.23
RTN3-214ENST00000545432 SNX1Q13596 522 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 ELAVL1Q15717 326 aaKnown RBP13.6□□□□□ -0.23
RTN3-214ENST00000545432 HECTD2Q5U5R9 776 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 ZNF470Q6ECI4 717 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 UGT3A1Q6NUS8 523 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 RAD9BQ6WBX8 426 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 HSDL2Q6YN16 418 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 MAATS1Q7Z4T9 603 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 LRRC75A-AS1Q8N1F1 130 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 TMEM132CQ8N3T6 1108 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 TBC1D19Q8N5T2 526 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 MORN4Q8NDC4 146 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 PTPMT1Q8WUK0 201 aaPredicted RBP13.6□□□□□ -0.23
RTN3-214ENST00000545432 LRRC46Q96FV0 321 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 FBXO6Q9NRD1 293 aaPredicted RBP13.6□□□□□ -0.23
RTN3-214ENST00000545432 PNO1Q9NRX1 252 aaKnown RBP13.6□□□□□ -0.23
RTN3-214ENST00000545432 SACM1LQ9NTJ5 587 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 TUBA8Q9NY65 449 aaPredicted RBP13.6□□□□□ -0.23
RTN3-214ENST00000545432 JKAMPQ9P055 326 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 SAMD15Q9P1V8 674 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 ARID1AO14497 2285 aa13.6□□□□□ -0.23
RTN3-214ENST00000545432 ATP6AP2A0A1C7CYW4 349 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 A0A1W2PPR1 153 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 CTAGE9A4FU28 777 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 AHRRA9YTQ3 701 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 DVL2O14641 736 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 AVILO75366 819 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 ATP6AP2O75787 350 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 HAUS5O94927 633 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 HRGP04196 525 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 F7P08709 466 aaPredicted RBP13.59□□□□□ -0.23
RTN3-214ENST00000545432 TACR1P25103 407 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 HNRNPFP52597 415 aaKnown RBP13.59□□□□□ -0.23
RTN3-214ENST00000545432 BASP1P80723 227 aaKnown RBP13.59□□□□□ -0.23
RTN3-214ENST00000545432 MPEG1Q2M385 716 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 OPN5Q6U736 354 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 PRSS57Q6UWY2 283 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 CAND1Q86VP6 1230 aaKnown RBP13.59□□□□□ -0.23
RTN3-214ENST00000545432 KIF18BQ86Y91 864 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 ZNF595Q8IYB9 648 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 LRRC25Q8N386 305 aaPredicted RBP13.59□□□□□ -0.23
RTN3-214ENST00000545432 GPATCH11Q8N954 259 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 TMEM52Q8NDY8 209 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 SLC5A11Q8WWX8 675 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 NEIL2Q969S2 332 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 PYCR2Q96C36 320 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 FBXL8Q96CD0 374 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 CCDC68Q9H2F9 335 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 PELI2Q9HAT8 420 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 PRTFDC1Q9NRG1 225 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 VTI1BQ9UEU0 232 aa13.59□□□□□ -0.23
RTN3-214ENST00000545432 MTRF1LQ9UGC7 380 aaKnown RBP13.59□□□□□ -0.23
RTN3-214ENST00000545432 ARHGAP21Q5T5U3 1957 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.58□□□□□ -0.24
RTN3-214ENST00000545432 TUBAL3A6NHL2 446 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 G3V3Y1 287 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 WWP2O00308 870 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 CYR61O00622 381 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 CLDN4O14493 209 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 CCL3P10147 92 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 ANP32AP39687 249 aaKnown RBP13.58□□□□□ -0.24
RTN3-214ENST00000545432 SLC1A2P43004 574 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 DNASE1L1P49184 302 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 RGS4P49798 205 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 AP1S2P56377 157 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 RAB38P57729 211 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 DHX34Q14147 1143 aaKnown RBP13.58□□□□□ -0.24
RTN3-214ENST00000545432 CSHL1Q14406 222 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 ZNF791Q3KP31 576 aaPredicted RBP13.58□□□□□ -0.24
RTN3-214ENST00000545432 PIGGQ5H8A4 983 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 FAM47EQ6ZV65 393 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 TNIP2Q8NFZ5 429 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 NEIL3Q8TAT5 605 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 PAQR8Q8TEZ7 354 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 DAZLQ92904 295 aaKnown RBP13.58□□□□□ -0.24
RTN3-214ENST00000545432 QRFPRQ96P65 431 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 PIP5K1AQ99755 562 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 RHBGQ9H310 441 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 LDAHQ9H6V9 325 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 ZNF703Q9H7S9 590 aaPredicted RBP13.58□□□□□ -0.24
RTN3-214ENST00000545432 PROK2Q9HC23 129 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 RYDENQ9NUL5 291 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms