RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 CD200R1Q8TD46 325 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 LRRC46Q96FV0 321 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 WDR83Q9BRX9 315 aaKnown RBP8.66□□□□□ -1.02
CHD4-212ENST00000545083 BDH2Q9BUT1 245 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 IL22Q9GZX6 179 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 EPB41L4BQ9H329 900 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 ZNF703Q9H7S9 590 aaPredicted RBP8.66□□□□□ -1.02
CHD4-212ENST00000545083 SACM1LQ9NTJ5 587 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 ZNF629Q9UEG4 869 aaPredicted RBP8.66□□□□□ -1.02
CHD4-212ENST00000545083 PACSIN2Q9UNF0 486 aaPredicted RBP8.66□□□□□ -1.02
CHD4-212ENST00000545083 PDE10AQ9Y233 779 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 MMACHCQ9Y4U1 282 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 PCDHGB3Q9Y5G1 929 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 NCKAP5O14513 1909 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 TRBC2A0A5B9 178 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 GRID2IPA4D2P6 1211 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 LRRC3CA6NJW4 275 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 EEF1E1-BLOC1S5C9J1V9 151 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 GOLGA6L22H0YM25 854 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 EEF1E1O43324 174 aaKnown RBP8.65□□□□□ -1.02
CHD4-212ENST00000545083 LIASO43766 372 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 GOSR1O95249 250 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 EPPINO95925 133 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 TPM3P06753 285 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 ENO3P13929 434 aaPredicted RBP8.65□□□□□ -1.02
CHD4-212ENST00000545083 MGAT1P26572 445 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 STIP1P31948 543 aaKnown RBP8.65□□□□□ -1.02
CHD4-212ENST00000545083 TIMP3P35625 211 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 SCTRP47872 440 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 TRPC1P48995 793 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 CCR8P51685 355 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 SKP1P63208 163 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 RGS1Q08116 209 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 RUNX2Q13950 521 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 KCTD19Q17RG1 926 aaPredicted RBP8.65□□□□□ -1.02
CHD4-212ENST00000545083 KIAA0930Q6ICG6 404 aaPredicted RBP8.65□□□□□ -1.02
CHD4-212ENST00000545083 NIPAL1Q6NVV3 410 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 PRSS57Q6UWY2 283 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 HSDL2Q6YN16 418 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 STRA8Q7Z7C7 330 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 CILP2Q8IUL8 1156 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 DENND6AQ8IWF6 608 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 ANKRD53Q8N9V6 530 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 PYCR2Q96C36 320 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 PERPQ96FX8 193 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 SGCZQ96LD1 299 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 OR4K3Q96R72 315 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 GPR21Q99679 349 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 PIP5K1AQ99755 562 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 CLK4Q9HAZ1 481 aaKnown RBP8.65□□□□□ -1.02
CHD4-212ENST00000545083 FBXO6Q9NRD1 293 aaPredicted RBP8.65□□□□□ -1.02
CHD4-212ENST00000545083 PRTFDC1Q9NRG1 225 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 JKAMPQ9P055 326 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 KLHL42Q9P2K6 505 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 ZFP69BQ9UJL9 534 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 ZNF148Q9UQR1 794 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 DHRS7Q9Y394 339 aa8.65□□□□□ -1.02
CHD4-212ENST00000545083 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.65□□□□□ -1.02
CHD4-212ENST00000545083 A0A0G2JN53 185 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 MBD3L4A6NDZ8 208 aaPredicted RBP8.64□□□□□ -1.03
CHD4-212ENST00000545083 MBD3L5A6NJ08 208 aaPredicted RBP8.64□□□□□ -1.03
CHD4-212ENST00000545083 AKR1B15C9JRZ8 316 aaPredicted RBP8.64□□□□□ -1.03
CHD4-212ENST00000545083 PFDN6O15212 129 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 SIAH2O43255 324 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 AVILO75366 819 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 P04436 131 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 TPM1P09493 284 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 RPL22P35268 128 aaKnown RBP8.64□□□□□ -1.03
CHD4-212ENST00000545083 NPY2RP49146 381 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 CTBP1Q13363 440 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 BMPR2Q13873 1038 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 PHKG1Q16816 387 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 NEPROQ6NW34 567 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 CLNKQ7Z7G1 428 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 LACC1Q8IV20 430 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 LRRC25Q8N386 305 aaPredicted RBP8.64□□□□□ -1.03
CHD4-212ENST00000545083 FAM47BQ8NA70 645 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 PPP1R14CQ8TAE6 165 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 NEIL3Q8TAT5 605 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 SMPDL3BQ92485 455 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 KCNJ9Q92806 393 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 SNF8Q96H20 258 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 DACH2Q96NX9 599 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 TIMP4Q99727 224 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 HAUS8Q9BT25 410 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 LACRTQ9GZZ8 138 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 PROK2Q9HC23 129 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 SH2D2AQ9NP31 389 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 ACKR4Q9NPB9 350 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 ADAP2Q9NPF8 381 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 EIF2B3Q9NR50 452 aaKnown RBP8.64□□□□□ -1.03
CHD4-212ENST00000545083 BFARQ9NZS9 450 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 SOX13Q9UN79 622 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 NPFFR2Q9Y5X5 522 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 CHD3Q12873 2000 aaKnown RBP8.64□□□□□ -1.03
CHD4-212ENST00000545083 ROS1P08922 2347 aa8.64□□□□□ -1.03
CHD4-212ENST00000545083 SH3D21A4FU49 640 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 AHRRA9YTQ3 701 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 NRDCO43847 1150 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 IL2RAP01589 272 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms