RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 PHOSPHO2Q8TCD6 241 aa11.9□□□□□ -0.5
PAAF1-215ENST00000544909 SPPL3Q8TCT6 385 aa11.9□□□□□ -0.5
PAAF1-215ENST00000544909 APOBEC4Q8WW27 367 aaKnown RBP11.9□□□□□ -0.5
PAAF1-215ENST00000544909 ZBED6CLQ96FA7 236 aaPredicted RBP11.9□□□□□ -0.5
PAAF1-215ENST00000544909 TEFMQ96QE5 360 aaKnown RBP11.9□□□□□ -0.5
PAAF1-215ENST00000544909 NXF2Q9GZY0 626 aaKnown RBP11.9□□□□□ -0.5
PAAF1-215ENST00000544909 TMEM245Q9H330 911 aa11.9□□□□□ -0.5
PAAF1-215ENST00000544909 ACER3Q9NUN7 267 aa11.9□□□□□ -0.5
PAAF1-215ENST00000544909 TESMINQ9Y4I5 508 aa11.9□□□□□ -0.5
PAAF1-215ENST00000544909 NUP214P35658 2090 aaPredicted RBP11.9□□□□□ -0.51
PAAF1-215ENST00000544909 ANKDD1BA6NHY2 528 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 ZAR1LA6NP61 321 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 J3QRK9 145 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 LZTS3O60299 673 aaPredicted RBP11.89□□□□□ -0.51
PAAF1-215ENST00000544909 GADD45GO95257 159 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 TGFB1P01137 390 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 RPLP0P05388 317 aaKnown RBP11.89□□□□□ -0.51
PAAF1-215ENST00000544909 KLK1P06870 262 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 TPP2P29144 1249 aaPredicted RBP11.89□□□□□ -0.51
PAAF1-215ENST00000544909 PBLDP30039 288 aaPredicted RBP11.89□□□□□ -0.51
PAAF1-215ENST00000544909 MAP2K4P45985 399 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 MAPK10P53779 464 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 CDH12P55289 794 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 REEP5Q00765 189 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 DMPKQ09013 629 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 KRR1Q13601 381 aaKnown RBP11.89□□□□□ -0.51
PAAF1-215ENST00000544909 TIGD6Q17RP2 521 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 LRRC26Q2I0M4 334 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 C19orf48Q6RUI8 117 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 CCDC81Q6ZN84 652 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 RNF130Q86XS8 419 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 GALNT6Q8NCL4 622 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 SMPDL3AQ92484 453 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 Q96MT0 163 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 ALPK1Q96QP1 1244 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 RAB11FIP5Q9BXF6 653 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 MS4A8Q9BY19 250 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 SLC6A16Q9GZN6 736 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 OR51B5Q9H339 312 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 RASSF1Q9NS23 344 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 DEC1Q9P2X7 70 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 FAM8A1Q9UBU6 413 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 ACSL5Q9ULC5 683 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 ASF1AQ9Y294 204 aa11.89□□□□□ -0.51
PAAF1-215ENST00000544909 MRPS23Q9Y3D9 190 aaKnown RBP11.89□□□□□ -0.51
PAAF1-215ENST00000544909 MN1Q10571 1320 aaPredicted RBP11.89□□□□□ -0.51
PAAF1-215ENST00000544909 KIAA1549LQ6ZVL6 1849 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 TMEM247A6NEH6 219 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 MAGEB3O15480 346 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 AIREO43918 545 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 FOXD2O60548 495 aaPredicted RBP11.88□□□□□ -0.51
PAAF1-215ENST00000544909 KCNJ13O60928 360 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 KLHL18O94889 574 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 SLITRK5O94991 958 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 C1QCP02747 245 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 IL3P08700 152 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 AQP1P29972 269 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 CTNNB1P35222 781 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 GJA8P48165 433 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 CLK1P49759 484 aaKnown RBP11.88□□□□□ -0.51
PAAF1-215ENST00000544909 ANXA11P50995 505 aaKnown RBP11.88□□□□□ -0.51
PAAF1-215ENST00000544909 CCR8P51685 355 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 MAPK12P53778 367 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 SNRPGP62308 76 aaKnown RBP11.88□□□□□ -0.51
PAAF1-215ENST00000544909 RELAQ04206 551 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 CNTN1Q12860 1018 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 SFSWAPQ12872 951 aaKnown RBP11.88□□□□□ -0.51
PAAF1-215ENST00000544909 ITGADQ13349 1161 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 DGCR6Q14129 220 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 SMN1Q16637 294 aaKnown RBP11.88□□□□□ -0.51
PAAF1-215ENST00000544909 NDUFA9Q16795 377 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 EXOC3L2Q2M3D2 409 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 ZNF404Q494X3 552 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 FNDC3BQ53EP0 1204 aaKnown RBP11.88□□□□□ -0.51
PAAF1-215ENST00000544909 TMEM201Q5SNT2 666 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 FAM46CQ5VWP2 391 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 MEDAGQ5VYS4 303 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 METRNLQ641Q3 311 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 PPP2R2DQ66LE6 453 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 ZNF770Q6IQ21 691 aaPredicted RBP11.88□□□□□ -0.51
PAAF1-215ENST00000544909 GDPGP1Q6ZNW5 385 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 VN1R5Q7Z5H4 357 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 NUDT13Q86X67 352 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 NDNFQ8TB73 568 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 CXorf40AQ8TE69 158 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 POF1BQ8WVV4 589 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 ARRDC3Q96B67 414 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 BTBD2Q9BX70 525 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 ZNF717Q9BY31 904 aaPredicted RBP11.88□□□□□ -0.51
PAAF1-215ENST00000544909 DSN1Q9H410 356 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 SP140LQ9H930 580 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 CPNE5Q9HCH3 593 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 LMCD1Q9NZU5 365 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 TAAR2Q9P1P5 351 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 ACAD8Q9UKU7 415 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 MKLN1Q9UL63 735 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 MGAT4BQ9UQ53 548 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 ITM2BQ9Y287 266 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 DGKBQ9Y6T7 804 aa11.88□□□□□ -0.51
PAAF1-215ENST00000544909 FAAHO00519 579 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms