RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 GDPD1Q8N9F7 314 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 TP53I13Q8NBR0 393 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ISG20Q96AZ6 181 aaKnown RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 RNF145Q96MT1 663 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 FYTTD1Q96QD9 318 aaKnown RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 CRB3Q9BUF7 120 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 SLC6A17Q9H1V8 727 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 CXCL16Q9H2A7 254 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 FAM124BQ9H5Z6 455 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 PLCXD1Q9NUJ7 323 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 MED9Q9NWA0 146 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 RCOR3Q9P2K3 495 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 SLC17A6Q9P2U8 582 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ERVK-18Q9QC07 812 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 AFF4Q9UHB7 1163 aaKnown RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 PHF11Q9UIL8 331 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 NUDT5Q9UKK9 219 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 SNX6Q9UNH7 406 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 RNF6Q9Y252 685 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ACOT9Q9Y305 439 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 PRELID3BQ9Y3B1 194 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 RNF215Q9Y6U7 377 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 PCDH15Q96QU1 1955 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 SPTA1P02549 2419 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 FREM2Q5SZK8 3169 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 C2CD4BA6NLJ0 364 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 A8MX80 341 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 PTGES3LE9PB15 166 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 E9PQ18 207 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 H7C4K7 107 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 I3L521 148 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 M0R082 166 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 AP3D1O14617 1153 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 RRP8O43159 456 aaKnown RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 VPS26AO75436 327 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 TGM6O95932 706 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 MT-ND2P03891 347 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ANXA6P08133 673 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 SYPP08247 313 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ATXN1LP0C7T5 689 aaKnown RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 RRASP10301 218 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 SLC2A3P11169 496 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ARSAP15289 507 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 TNNI3P19429 210 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 CAPN3P20807 821 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ZP3P21754 424 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ALDH4A1P30038 563 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 KRT20P35900 424 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 PIGAP37287 484 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 HOXA1P49639 335 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 PER3P56645 1201 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 LSM3P62310 102 aaKnown RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 RCAN2Q14206 197 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 GRK1Q15835 563 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 DPYSL2Q16555 572 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 AANATQ16613 207 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 HKDC1Q2TB90 917 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 BTBD16Q32M84 506 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 UGT3A2Q3SY77 523 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 PITRM1Q5JRX3 1037 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 FAM182AQ5T1J6 154 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 CACHD1Q5VU97 1274 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 FCRLBQ6BAA4 426 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 LAMTOR1Q6IAA8 161 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 GLYATQ6IB77 296 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 TYW3Q6IPR3 259 aaKnown RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 SPATA19Q7Z5L4 167 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 CUZD1Q86UP6 607 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 TSPYL5Q86VY4 417 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 RNF130Q86XS8 419 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 WFDC8Q8IUA0 241 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 SAMD14Q8IZD0 417 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 TAGAPQ8N103 731 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 DPP10Q8N608 796 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 FRMD1Q8N878 549 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 YIPF7Q8N8F6 280 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 MCPH1Q8NEM0 835 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 VANGL1Q8TAA9 524 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ZNF417Q8TAU3 575 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ANKRD49Q8WVL7 239 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 HTR3CQ8WXA8 447 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 NXPE2Q96DL1 559 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ZNF587Q96SQ5 575 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 PELOQ9BRX2 385 aaKnown RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 FAM213AQ9BRX8 229 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 RNF121Q9H920 327 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 XPR1Q9UBH6 696 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 LEF1Q9UJU2 399 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 CDH9Q9ULB4 789 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ACSL5Q9ULC5 683 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 CBLCQ9ULV8 474 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 RUVBL2Q9Y230 463 aaKnown RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 BTRCQ9Y297 605 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ACACAQ13085 2346 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 USP9XQ93008 2570 aaPredicted RBP4.41□□□□□ -1.7
CNGA1-209ENST00000544810 KIF26AQ9ULI4 1882 aaPredicted RBP4.41□□□□□ -1.7
CNGA1-209ENST00000544810 ELOA3CA0A087WX78 387 aaPredicted RBP4.41□□□□□ -1.7
CNGA1-209ENST00000544810 ELOA3DA6NLF2 546 aaPredicted RBP4.41□□□□□ -1.7
CNGA1-209ENST00000544810 H3BUI4 141 aa4.41□□□□□ -1.7
CNGA1-209ENST00000544810 NR5A2O00482 541 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms