RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 A0A0A6YYD5 115 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 SERTM1A2A2V5 107 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 ARGFXA6NJG6 315 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 TMEM233B4DJY2 109 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 MASP2O00187 686 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 PSMD12O00232 456 aaPredicted RBP14.21□□□□□ -0.13
CD9-210ENST00000543916 CYR61O00622 381 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 AZIN1O14977 448 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 ITM2AO43736 263 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 TMPRSS11DO60235 418 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 B4GALT2O60909 372 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 ALOX12BO75342 701 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 IGHEP01854 428 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 GBAP04062 536 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 HNRNPH2P55795 449 aaKnown RBP14.21□□□□□ -0.13
CD9-210ENST00000543916 BTG2P78543 158 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 HMGCS1Q01581 520 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 ZNF33BQ06732 778 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 SLAMF1Q13291 335 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 KANK2Q63ZY3 851 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 TMEM205Q6UW68 189 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 KIRREL2Q6UWL6 708 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 LANCL3Q6ZV70 420 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 MED25Q71SY5 747 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 METTL4Q8N3J2 472 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 ZCCHC7Q8N3Z6 543 aaKnown RBP14.21□□□□□ -0.13
CD9-210ENST00000543916 GOLGA6L1Q8N7Z2 621 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 AGR3Q8TD06 166 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 TTC9Q92623 222 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 TSLPQ969D9 159 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 C20orf27Q9GZN8 174 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 DDX31Q9H8H2 851 aaKnown RBP14.21□□□□□ -0.13
CD9-210ENST00000543916 LYRM4Q9HD34 91 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 P4HTMQ9NXG6 502 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 NKIRAS1Q9NYS0 192 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 VPS29Q9UBQ0 182 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 FBXW2Q9UKT8 454 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 PTGDR2Q9Y5Y4 395 aa14.21□□□□□ -0.13
CD9-210ENST00000543916 HMGB1P1B2RPK0 211 aaPredicted RBP14.2□□□□□ -0.14
CD9-210ENST00000543916 ITGB2P05107 769 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 JAK1P23458 1154 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 TPP2P29144 1249 aaPredicted RBP14.2□□□□□ -0.14
CD9-210ENST00000543916 CHAF1BQ13112 559 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 LINC00303Q3SY05 128 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 SH2D4BQ5SQS7 431 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 MRM1Q6IN84 353 aaKnown RBP14.2□□□□□ -0.14
CD9-210ENST00000543916 BORAQ6PGQ7 559 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 COMMD6Q7Z4G1 85 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 NUDT13Q86X67 352 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 C1orf52Q8N6N3 182 aaKnown RBP14.2□□□□□ -0.14
CD9-210ENST00000543916 GBP7Q8N8V2 638 aaPredicted RBP14.2□□□□□ -0.14
CD9-210ENST00000543916 OR11G2Q8NGC1 345 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 ADAMTS18Q8TE60 1221 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 NACC2Q96BF6 587 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 IP6K3Q96PC2 410 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 TRIM55Q9BYV6 548 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 TUBB1Q9H4B7 451 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 EML4Q9HC35 981 aaKnown RBP14.2□□□□□ -0.14
CD9-210ENST00000543916 ZDHHC2Q9UIJ5 367 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 FBXL4Q9UKA2 621 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 TRAF6Q9Y4K3 522 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 ASB4Q9Y574 426 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 DNAJC15Q9Y5T4 150 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 ATMQ13315 3056 aa14.2□□□□□ -0.14
CD9-210ENST00000543916 LOC102723996A0A087X1L8 192 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 TMEM114B3SHH9 223 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 TGFBR3LH3BV60 316 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 PEX12O00623 359 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 HSPA4LO95757 839 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 KLK1P06870 262 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 CYC1P08574 325 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 FGF4P08620 206 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 FAM58BPP0C7Q3 252 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 C8orf89P0DMQ9 161 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 NEFHP12036 1026 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 ACPPP15309 386 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 MAOAP21397 527 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 ABCE1P61221 599 aaKnown RBP14.19□□□□□ -0.14
CD9-210ENST00000543916 RHDQ02161 417 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 EEF1A2Q05639 463 aaKnown RBP14.19□□□□□ -0.14
CD9-210ENST00000543916 UGT3A2Q3SY77 523 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 QSOX2Q6ZRP7 698 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 TRIM46Q7Z4K8 759 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 ANKRD37Q7Z713 158 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 GPR180Q86V85 440 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 APLFQ8IW19 511 aaPredicted RBP14.19□□□□□ -0.14
CD9-210ENST00000543916 SCUBE1Q8IWY4 988 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 EFCAB3Q8N7B9 438 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 PLPP5Q8NEB5 264 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 CHTF18Q8WVB6 975 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 APOBEC4Q8WW27 367 aaKnown RBP14.19□□□□□ -0.14
CD9-210ENST00000543916 NECTIN3Q9NQS3 549 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 PRDM9Q9NQV7 894 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 NMRK1Q9NWW6 199 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 LYARQ9NX58 379 aaKnown RBP14.19□□□□□ -0.14
CD9-210ENST00000543916 AHSPQ9NZD4 102 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 ADAM29Q9UKF5 820 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 ATG4BQ9Y4P1 393 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 CCL27Q9Y4X3 112 aa14.19□□□□□ -0.14
CD9-210ENST00000543916 IGKV3D-11A0A0A0MRZ8 115 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms