RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 FAM58BPP0C7Q3 252 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 LINC00032P0C843 101 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 CERS1P27544 350 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 PPP2R1BP30154 601 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 TIA1P31483 386 aaKnown RBP eCLIP11.5□□□□□ -0.57
DDX55-210ENST00000543016 BUD31P41223 144 aaPredicted RBP11.5□□□□□ -0.57
DDX55-210ENST00000543016 FOLR3P41439 243 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 XCR1P46094 333 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 MAPK12P53778 367 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 LIM2P55344 173 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 HMGCS1Q01581 520 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 RUNX2Q13950 521 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 SSPNQ14714 243 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 NR6A1Q15406 480 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 TGIF1Q15583 401 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 ATP6AP1LQ52LC2 224 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 LCN10Q6JVE6 187 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 FAM199XQ6PEV8 388 aaPredicted RBP11.5□□□□□ -0.57
DDX55-210ENST00000543016 SCIMPQ6UWF3 145 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 ZNF793Q6ZN11 406 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 GPR180Q86V85 440 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 ZC3H7AQ8IWR0 971 aaKnown RBP11.5□□□□□ -0.57
DDX55-210ENST00000543016 FAM9CQ8IZT9 166 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 C1orf52Q8N6N3 182 aaKnown RBP11.5□□□□□ -0.57
DDX55-210ENST00000543016 ENDOVQ8N8Q3 282 aaKnown RBP11.5□□□□□ -0.57
DDX55-210ENST00000543016 ZSCAN1Q8NBB4 408 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 PLPP5Q8NEB5 264 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.5□□□□□ -0.57
DDX55-210ENST00000543016 STON2Q8WXE9 905 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 HBEGFQ99075 208 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 SPSB2Q99619 263 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 FAIM2Q9BWQ8 316 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 MEAF6Q9HAF1 191 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 PNPOQ9NVS9 261 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 KCMF1Q9P0J7 381 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 HCN3Q9P1Z3 774 aa11.5□□□□□ -0.57
DDX55-210ENST00000543016 TPRP12270 2363 aaKnown RBP11.5□□□□□ -0.57
DDX55-210ENST00000543016 SPEGQ15772 3267 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 A0A0G2JN53 185 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 ZNF860A6NHJ4 632 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 ZNF891A8MT65 544 aaPredicted RBP11.49□□□□□ -0.57
DDX55-210ENST00000543016 TCP11X1B4DZS4 312 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 LSM1O15116 133 aaKnown RBP11.49□□□□□ -0.57
DDX55-210ENST00000543016 PCDH7O60245 1069 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 CREG1O75629 220 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 KLF7O75840 302 aaPredicted RBP11.49□□□□□ -0.57
DDX55-210ENST00000543016 DRD2P14416 443 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 LIFP15018 202 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 DDX5P17844 614 aaKnown RBP11.49□□□□□ -0.57
DDX55-210ENST00000543016 CPN2P22792 545 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 TPP2P29144 1249 aaPredicted RBP11.49□□□□□ -0.57
DDX55-210ENST00000543016 HSD17B7P56937 341 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 MAT1AQ00266 395 aaKnown RBP11.49□□□□□ -0.57
DDX55-210ENST00000543016 BTKQ06187 659 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 KIAA0040Q15053 153 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 QSOX2Q6ZRP7 698 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 IKBIPQ70UQ0 350 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 RAB43Q86YS6 212 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 OR5T3Q8NGG3 340 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 TANKQ92844 425 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 TUBGCP3Q96CW5 907 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 APIPQ96GX9 242 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 PEX11GQ96HA9 241 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 FCRL1Q96LA6 429 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 ACTL8Q9H568 366 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 FAM53CQ9NYF3 392 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 CTSFQ9UBX1 484 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 MAPRE3Q9UPY8 281 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 PTRH2Q9Y3E5 179 aaKnown RBP11.49□□□□□ -0.57
DDX55-210ENST00000543016 ASB4Q9Y574 426 aa11.49□□□□□ -0.57
DDX55-210ENST00000543016 GNG14A0A1W2PPG7 69 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 CYR61O00622 381 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 PROM1O43490 865 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 TMPRSS11DO60235 418 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 PRMT3O60678 531 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 EDF1O60869 148 aaKnown RBP11.48□□□□□ -0.57
DDX55-210ENST00000543016 CTNSO60931 367 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 EEDO75530 441 aaKnown RBP11.48□□□□□ -0.57
DDX55-210ENST00000543016 SKAP2O75563 359 aaPredicted RBP11.48□□□□□ -0.57
DDX55-210ENST00000543016 HEXBP07686 556 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 ANXA4P09525 319 aaPredicted RBP11.48□□□□□ -0.57
DDX55-210ENST00000543016 PRR35P0CG20 571 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 PRPS2P11908 318 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 ALOX15P16050 662 aaPredicted RBP11.48□□□□□ -0.57
DDX55-210ENST00000543016 MMP11P24347 488 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 ASMTP46597 345 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 EMP2P54851 167 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 SNRPNP63162 240 aaKnown RBP11.48□□□□□ -0.57
DDX55-210ENST00000543016 OLR1P78380 273 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 IRX1P78414 480 aaPredicted RBP11.48□□□□□ -0.57
DDX55-210ENST00000543016 GUCY1A3Q02108 690 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 TNFRSF17Q02223 184 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 EMX2Q04743 252 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 KLC1Q07866 573 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 ZNF763Q0D2J5 394 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 HEPACAMQ14CZ8 416 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 PDCD2Q16342 344 aaPredicted RBP11.48□□□□□ -0.57
DDX55-210ENST00000543016 VWA2Q5GFL6 755 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 C6orf136Q5SQH8 315 aa11.48□□□□□ -0.57
DDX55-210ENST00000543016 OGFOD2Q6N063 350 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms