RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 TFPTP0C1Z6 253 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 GP1BBP13224 206 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 RPL10P27635 214 aaKnown RBP12.63□□□□□ -0.39
TNC-212ENST00000542877 DCKP27707 260 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 PREPP48147 710 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 ACTC1P68032 377 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 ACTA1P68133 377 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 CLCA4Q14CN2 919 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 TIGD4Q8IY51 512 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 SCLYQ96I15 445 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 SEC61A2Q9H9S3 476 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 PLEKHA6Q9Y2H5 1048 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 M0R036 132 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 AHSA1O95433 338 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 LHCGRP22888 699 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 CRISP1P54107 249 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 GNG2P59768 71 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 SIX1Q15475 284 aaPredicted RBP12.62□□□□□ -0.39
TNC-212ENST00000542877 OR2T33Q8NG76 320 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 ZNF461Q8TAF7 563 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 ACTR6Q9GZN1 396 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 ZNF350Q9GZX5 532 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 SMOXQ9NWM0 555 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 TEX13DA0A0J9YY54 714 aaPredicted RBP12.62□□□□□ -0.39
TNC-212ENST00000542877 A0A1B0GVT2 93 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 SOBPA7XYQ1 873 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 CA12O43570 354 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 SCGB1D2O95969 90 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 C1GALT1C1LP0DN25 315 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 ANXA3P12429 323 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 PIGFQ07326 219 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 SLC10A2Q12908 348 aaPredicted RBP12.62□□□□□ -0.39
TNC-212ENST00000542877 SUSD1Q6UWL2 747 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 ZNF550Q7Z398 422 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 ZNF700Q9H0M5 742 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 PCDHGA2Q9Y5H1 932 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 A0A1B0GVI7 797 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 TRIM64CA6NLI5 447 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 OXSR1O95747 527 aaPredicted RBP12.62□□□□□ -0.39
TNC-212ENST00000542877 IL7P13232 177 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 FDXRP22570 491 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 SLC35F1Q5T1Q4 408 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 ZNF776Q68DI1 518 aaPredicted RBP12.62□□□□□ -0.39
TNC-212ENST00000542877 UBE2Q1Q7Z7E8 422 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 ANKRD13BQ86YJ7 626 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 OR4E2Q8NGC2 313 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 PHOSPHO1Q8TCT1 267 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 TXLNGYQ9BZA5 131 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 UBQLN2Q9UHD9 624 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 WASHC1A8K0Z3 465 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 WASH3PC4AMC7 463 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 SOCS2O14508 198 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 GRID2O43424 1007 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 PRKYO43930 277 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 ITGA5P08648 1049 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 TYRP14679 529 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 MAN2A2P49641 1150 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 GLT8D1Q68CQ7 371 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 WASH2PQ6VEQ5 465 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 NSMAFQ92636 917 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 CCDC120Q96HB5 630 aa12.62□□□□□ -0.39
TNC-212ENST00000542877 KIAA0513O60268 411 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 HCKP08631 526 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 BMP2P12643 396 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 JUPP14923 745 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 RHCEP18577 417 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 ACRV1P26436 265 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 IVDP26440 423 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 UGT2B10P36537 528 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 OR4D2P58180 307 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 GALNT1Q10472 559 aaPredicted RBP12.61□□□□□ -0.39
TNC-212ENST00000542877 SCAPQ12770 1279 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 C2orf27AQ580R0 203 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 KANK2Q63ZY3 851 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 C12orf40Q86WS4 652 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 FOXRED2Q8IWF2 684 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 Q8N402 240 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 OR5J2Q8NH18 312 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 RPLP0P6Q8NHW5 317 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 BCL7BQ9BQE9 202 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 PCDHB16Q9NRJ7 776 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 ACSL5Q9ULC5 683 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 MED1Q15648 1581 aaPredicted RBP12.61□□□□□ -0.39
TNC-212ENST00000542877 CLCA1A8K7I4 914 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 FBP2O00757 339 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 STATHP02808 62 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 CKMT1AP12532 417 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 STT3AP46977 705 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 SLC11A1P49279 550 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 C15orf39Q6ZRI6 1047 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 NRROSQ86YC3 692 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 SIAH1Q8IUQ4 282 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 OR4K14Q8NGD5 310 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 RELTQ969Z4 430 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 PNPLA2Q96AD5 504 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 POLE4Q9NR33 117 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 LIPT1Q9Y234 373 aa12.61□□□□□ -0.39
TNC-212ENST00000542877 FARSAQ9Y285 508 aaKnown RBP12.61□□□□□ -0.39
TNC-212ENST00000542877 MAGED1Q9Y5V3 778 aaPredicted RBP12.61□□□□□ -0.39
TNC-212ENST00000542877 A8MV72 311 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms