RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 CLCNKAP51800 687 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 ZNF140P52738 457 aaPredicted RBP4.28□□□□□ -1.72
MDM2-228ENST00000542502 ADARP55265 1226 aaKnown RBP4.28□□□□□ -1.72
MDM2-228ENST00000542502 TXNL4AP83876 142 aaKnown RBP4.28□□□□□ -1.72
MDM2-228ENST00000542502 ILF3Q12906 894 aaKnown RBP eCLIP4.28□□□□□ -1.724e-7■■■□□ 16.4
MDM2-228ENST00000542502 RPA4Q13156 261 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 NFATC2Q13469 925 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 NAB1Q13506 487 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 THOC5Q13769 683 aaKnown RBP4.28□□□□□ -1.72
MDM2-228ENST00000542502 PDE1CQ14123 709 aaPredicted RBP4.28□□□□□ -1.72
MDM2-228ENST00000542502 POU6F1Q14863 301 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 IRF4Q15306 451 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 CDKN3Q16667 212 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 PRTGQ2VWP7 1150 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 BTBD16Q32M84 506 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 AASDHQ4L235 1098 aaPredicted RBP4.28□□□□□ -1.72
MDM2-228ENST00000542502 FASTKD1Q53R41 847 aaKnown RBP4.28□□□□□ -1.72
MDM2-228ENST00000542502 SPANXN3Q5MJ09 141 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 SEL1L3Q68CR1 1132 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 KIAA0930Q6ICG6 404 aaPredicted RBP4.28□□□□□ -1.72
MDM2-228ENST00000542502 LRRC8EQ6NSJ5 796 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 PACS1Q6VY07 963 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 USP43Q70EL4 1123 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 B4GALNT4Q76KP1 1039 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 HSD11B1LQ7Z5J1 315 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 CCDC91Q7Z6B0 441 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 PTAR1Q7Z6K3 402 aaPredicted RBP4.28□□□□□ -1.72
MDM2-228ENST00000542502 GALNT7Q86SF2 657 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 TMEM135Q86UB9 458 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 GKN2Q86XP6 184 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 GALNT13Q8IUC8 556 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 RBFAQ8N0V3 343 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 TTC30BQ8N4P2 665 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 OR4K2Q8NGD2 314 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 OR52K1Q8NGK4 314 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 OR4L1Q8NH43 312 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 GSDMBQ8TAX9 411 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 GDAP1Q8TB36 358 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 PYROXD1Q8WU10 500 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 CPT1BQ92523 772 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 CDKL2Q92772 493 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 ART4Q93070 314 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 STAMBPL1Q96FJ0 436 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 CDKN2AIPNLQ96HQ2 116 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 COX14Q96I36 57 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 ZNF479Q96JC4 524 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 VPS50Q96JG6 964 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 UBXN10Q96LJ8 280 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 SERPINB12Q96P63 405 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 FMO2Q99518 471 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 COPS8Q99627 209 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 EBNA1BP2Q99848 306 aaKnown RBP4.28□□□□□ -1.72
MDM2-228ENST00000542502 CCDC77Q9BR77 488 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 CCM2Q9BSQ5 444 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 FAM167BQ9BTA0 163 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 RIOK2Q9BVS4 552 aaKnown RBP4.28□□□□□ -1.72
MDM2-228ENST00000542502 GSDMCQ9BYG8 508 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 ABCG8Q9H221 673 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 CCDC68Q9H2F9 335 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 SLC32A1Q9H598 525 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 STN1Q9H668 368 aaKnown RBP4.28□□□□□ -1.72
MDM2-228ENST00000542502 ASB8Q9H765 288 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 SAYSD1Q9NPB0 183 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 IL26Q9NPH9 171 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 ARL8BQ9NVJ2 186 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 INTS10Q9NVR2 710 aaKnown RBP4.28□□□□□ -1.72
MDM2-228ENST00000542502 KIF17Q9P2E2 1029 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 KLQ9UEF7 1012 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 STEAP1Q9UHE8 339 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 ACSL5Q9ULC5 683 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 CORO1CQ9ULV4 474 aaPredicted RBP4.28□□□□□ -1.72
MDM2-228ENST00000542502 SLC17A4Q9Y2C5 497 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 MAD1L1Q9Y6D9 718 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 FAM169AQ9Y6X4 670 aa4.28□□□□□ -1.72
MDM2-228ENST00000542502 CNOT1A5YKK6 2376 aaKnown RBP4.28□□□□□ -1.72
MDM2-228ENST00000542502 DOCK9Q9BZ29 2069 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 IGLV3-16A0A075B6K0 115 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 TRBV5-4A0A0C4DH59 114 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 A0A1B0GTQ1 180 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 C17orf113A0A1B0GUU1 675 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 A8MX80 341 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 ZNF814B7Z6K7 855 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 E7ESA3 106 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 LMO7DNF2Z398 122 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 EIF3FO00303 357 aaPredicted RBP4.27□□□□□ -1.73
MDM2-228ENST00000542502 PLK4O00444 970 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 SCAMP1O15126 338 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 RAD51CO43502 376 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 NDUFS3O75489 264 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 GJB3O75712 270 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 CDK14O94921 469 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 WDR47O94967 919 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 NDUFB8O95169 186 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 RPN2P04844 631 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 PCCBP05166 539 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 NGFRP08138 427 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 OR56A5P0C7T3 313 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 PIRTP0C851 137 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 ETS1P14921 441 aa4.27□□□□□ -1.73
MDM2-228ENST00000542502 OGNP20774 298 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms