RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 TSPAN12O95859 305 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 PTTG1O95997 202 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 PDGFAP04085 211 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 RBP1P09455 135 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 MTHFD2P13995 350 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 PIGAP37287 484 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 ALDH3A2P51648 485 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 ATP12AP54707 1039 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 DEFA1P59665 94 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 DEFA3P59666 94 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 MFSD13AQ14CX5 517 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 PFKFB4Q16877 469 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 TMEM215Q68D42 235 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 C22orf39Q6P5X5 142 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 ZCCHC12Q6PEW1 402 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 ZNF438Q7Z4V0 828 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 ADGRD2Q7Z7M1 963 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 CUZD1Q86UP6 607 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 ADIPOR2Q86V24 386 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 NLRP8Q86W28 1048 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 LACC1Q8IV20 430 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 NLGN4XQ8N0W4 816 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 IRF7Q92985 503 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 ROPN1LQ96C74 230 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 L3HYPDHQ96EM0 354 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 TMEM74Q96NL1 305 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 LRRC3BQ96PB8 259 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 LYSMD1Q96S90 227 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 ATOH8Q96SQ7 321 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 SLIRPQ9GZT3 109 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 GSTO2Q9H4Y5 243 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 CCDC86Q9H6F5 360 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 ALG9Q9H6U8 611 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 NECTIN3Q9NQS3 549 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 SPHK2Q9NRA0 654 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 COA4Q9NYJ1 87 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 ZIM2Q9NZV7 527 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 MARK1Q9P0L2 795 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 NDUFAF1Q9Y375 327 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 AP1M2Q9Y6Q5 423 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 NEDD8-MDP1E9PL57 170 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 SLC1A7O00341 560 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 STX7O15400 261 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 GOSR1O95249 250 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 IGSF6O95976 241 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 CYBBP04839 570 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 SLC6A2P23975 617 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 FMO3P31513 532 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 GPC1P35052 558 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 SOX9P48436 509 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 GSK3BP49841 420 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 BCL2L1Q07817 233 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 NFYCQ13952 458 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 KCNAB1Q14722 419 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 ARHGAP15Q53QZ3 475 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 C9orf50Q5SZB4 431 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 TTC23Q5W5X9 447 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 PIWIL4Q7Z3Z4 852 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 GRASPQ7Z6J2 395 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 RBM23Q86U06 439 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 CDH24Q86UP0 819 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 ZDHHC13Q8IUH4 622 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 TMIEQ8NEW7 156 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 RHEBL1Q8TAI7 183 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 QRFPRQ96P65 431 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 HOPXQ9BPY8 73 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 COPS4Q9BT78 406 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 ZBTB20Q9HC78 741 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 UFSP2Q9NUQ7 469 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 FAM118AQ9NWS6 357 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 COPS3Q9UNS2 423 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 PPIL1Q9Y3C6 166 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 PCDHGB1Q9Y5G3 927 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 PTGDR2Q9Y5Y4 395 aa7.67□□□□□ -1.18
PDLIM5-221ENST00000542407 TRBV5-4A0A0C4DH59 114 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 SAGE2PA6NJ88 616 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 EFCAB9A8MZ26 197 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 H3BM21 787 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 UBFD1O14562 309 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 HS6ST1O60243 411 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 PRKD3O94806 890 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 SLC34A2O95436 690 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 TYRP14679 529 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 PRKACGP22612 351 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 GRK3P35626 688 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 GPR3P46089 330 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 HTR3AP46098 478 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 TTPAP49638 278 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 ZNF404Q494X3 552 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 OXLD1Q5BKU9 147 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 Q5BKY6 102 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 ZNF697Q5TEC3 545 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 C3orf33Q6P1S2 294 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 PAQR3Q6TCH7 311 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 DMRTC2Q8IXT2 367 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 FNDC5Q8NAU1 212 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 SNAPC3Q92966 411 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 LRRC58Q96CX6 371 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 RSPRY1Q96DX4 576 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 DERL2Q9GZP9 239 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms