RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 DEFB133Q30KQ1 61 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 FILIP1LQ4L180 1135 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 SOWAHCQ53LP3 525 aaPredicted RBP7.87□□□□□ -1.15
MRPS35-204ENST00000542199 CAVIN1Q6NZI2 390 aaKnown RBP7.87□□□□□ -1.15
MRPS35-204ENST00000542199 CDC73Q6P1J9 531 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 GUSBP11Q6P575 273 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 COLCA1Q6ZS62 124 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 PXKQ7Z7A4 578 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 DENND6AQ8IWF6 608 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 GJC3Q8NFK1 279 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 MAPK15Q8TD08 544 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 LMX1AQ8TE12 382 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 FGF11Q92914 225 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 ZNF653Q96CK0 615 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 ZC3HAV1LQ96H79 300 aaKnown RBP7.87□□□□□ -1.15
MRPS35-204ENST00000542199 NCAPGQ9BPX3 1015 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 ISCUQ9H1K1 167 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 ATP13A3Q9H7F0 1226 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 CWC15Q9P013 229 aaKnown RBP7.87□□□□□ -1.15
MRPS35-204ENST00000542199 SPASTQ9UBP0 616 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 CNOT8Q9UFF9 292 aaKnown RBP7.87□□□□□ -1.15
MRPS35-204ENST00000542199 NDRG3Q9UGV2 375 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 CARD8Q9Y2G2 431 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 PSAT1Q9Y617 370 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 SCINQ9Y6U3 715 aa7.87□□□□□ -1.15
MRPS35-204ENST00000542199 TDRD6O60522 2096 aaKnown RBP7.87□□□□□ -1.15
MRPS35-204ENST00000542199 TMEM110-MUSTN1A8MSY1 372 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 TRAFD1O14545 582 aaPredicted RBP7.86□□□□□ -1.15
MRPS35-204ENST00000542199 LDB2O43679 373 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 PALMO75781 387 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 SYF2O95926 243 aaKnown RBP7.86□□□□□ -1.15
MRPS35-204ENST00000542199 SKILP12757 684 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 TCF4P15884 667 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 CHMP24386 653 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 PPARDQ03181 441 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 IL10RBQ08334 325 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 FAM27E3Q08E93 113 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 TMEM115Q12893 351 aaPredicted RBP7.86□□□□□ -1.15
MRPS35-204ENST00000542199 RALGDSQ12967 914 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 NFATC4Q14934 902 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 CDKN3Q16667 212 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 ALG11Q2TAA5 492 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 BOLA3Q53S33 107 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 ESCO2Q56NI9 601 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 PPP6R3Q5H9R7 873 aaPredicted RBP7.86□□□□□ -1.15
MRPS35-204ENST00000542199 EFL1Q7Z2Z2 1120 aaKnown RBP7.86□□□□□ -1.15
MRPS35-204ENST00000542199 C1QL2Q7Z5L3 287 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 PCGF5Q86SE9 256 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 SLC35F3Q8IY50 421 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 C7orf57Q8NEG2 295 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 GABPB2Q8TAK5 448 aaPredicted RBP7.86□□□□□ -1.15
MRPS35-204ENST00000542199 SYN2Q92777 582 aaPredicted RBP7.86□□□□□ -1.15
MRPS35-204ENST00000542199 NSMCE3Q96MG7 304 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 ZNF578Q96N58 590 aaPredicted RBP7.86□□□□□ -1.15
MRPS35-204ENST00000542199 ZNF599Q96NL3 588 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 PSKH2Q96QS6 385 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 IL12RB2Q99665 862 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 TMEM79Q9BSE2 394 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 ABCG4Q9H172 646 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 SCPEP1Q9HB40 452 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 MRPL47Q9HD33 250 aaKnown RBP7.86□□□□□ -1.15
MRPS35-204ENST00000542199 RNF7Q9UBF6 113 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 RAI2Q9Y5P3 530 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 A3GALT2U3KPV4 340 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 COL6A6A6NMZ7 2263 aa7.86□□□□□ -1.15
MRPS35-204ENST00000542199 PRRC2CQ9Y520 2896 aaKnown RBP7.85□□□□□ -1.15
MRPS35-204ENST00000542199 COL12A1Q99715 3063 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 LRRK2Q5S007 2527 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 A0A1W2PNU3 283 aaPredicted RBP7.85□□□□□ -1.15
MRPS35-204ENST00000542199 CPED1A4D0V7 1026 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 F5H0A9 414 aaPredicted RBP7.85□□□□□ -1.15
MRPS35-204ENST00000542199 OVOL3O00110 214 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 DFFAO00273 331 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 RRP8O43159 456 aaKnown RBP7.85□□□□□ -1.15
MRPS35-204ENST00000542199 KLK8O60259 260 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 CSO75390 466 aaKnown RBP7.85□□□□□ -1.15
MRPS35-204ENST00000542199 TFPIP10646 304 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 GM2AP17900 193 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 ACTN2P35609 894 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 TRIM23P36406 574 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 KIAA1024LP59773 190 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 AP1S1P61966 158 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 BCL2L1Q07817 233 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 SLC10A7Q0GE19 358 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 C1orf61Q13536 156 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 ISXQ2M1V0 245 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 CFAP58Q5T655 872 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 KCTD16Q68DU8 428 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 HIST2H2BCQ6DN03 193 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 HIST2H2BDQ6DRA6 164 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 DPPA4Q7L190 304 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 ARL10Q8N8L6 244 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 NIPA2Q8N8Q9 360 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 NAT6Q93015 286 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 CSPG4P5Q96PW8 444 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 BARD1Q99728 777 aaKnown RBP7.85□□□□□ -1.15
MRPS35-204ENST00000542199 APOOQ9BUR5 198 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 PRORYQ9H606 182 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 ZWILCHQ9H900 591 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 POLR1BQ9H9Y6 1135 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms