RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TUBB6Q9BUF5 446 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 GSTO2Q9H4Y5 243 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 PPCSQ9HAB8 311 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 TNFRSF12AQ9NP84 129 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 PRDM9Q9NQV7 894 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 PSD3Q9NYI0 1048 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 PLA2G3Q9NZ20 509 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 C5AR2Q9P296 337 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 PTGFRNQ9P2B2 879 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 LGALS13Q9UHV8 139 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 ADGRE2Q9UHX3 823 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 ANAPC2Q9UJX6 822 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 PLAAQ9Y263 795 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 PCDHGB7Q9Y5F8 929 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 TNRC6AQ8NDV7 1962 aaKnown RBP9.13□□□□□ -0.95
YBX3-212ENST00000542002 ZNF462Q96JM2 2506 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 TLN1Q9Y490 2541 aaKnown RBP9.12□□□□□ -0.95
YBX3-212ENST00000542002 PCDH17O14917 1159 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 TMPRSS11DO60235 418 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 PRKRAO75569 313 aaKnown RBP9.12□□□□□ -0.95
YBX3-212ENST00000542002 SORBS2O94875 1100 aaKnown RBP9.12□□□□□ -0.95
YBX3-212ENST00000542002 OR4F21O95013 312 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 F10P00742 488 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 PDYNP01213 254 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 GBAP04062 536 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 CYC1P08574 325 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 CHN1P15882 459 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 TAC1P20366 129 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 JAK1P23458 1154 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 SERPINB1P30740 379 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 CCT5P48643 541 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 SKP1P63208 163 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 ACTN3Q08043 901 aaPredicted RBP9.12□□□□□ -0.95
YBX3-212ENST00000542002 ZNF844Q08AG5 666 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 CUL3Q13618 768 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 AP5B1Q2VPB7 878 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 BTBD16Q32M84 506 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 GGTA1PQ4G0N0 100 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 PRR30Q53SZ7 412 aaPredicted RBP9.12□□□□□ -0.95
YBX3-212ENST00000542002 CRB2Q5IJ48 1285 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 C18orf63Q68DL7 685 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 FCRLBQ6BAA4 426 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 PLAG1Q6DJT9 500 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 H3F3CQ6NXT2 135 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 PAPD4Q6PIY7 484 aaKnown RBP9.12□□□□□ -0.95
YBX3-212ENST00000542002 ATG14Q6ZNE5 492 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 CLNKQ7Z7G1 428 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 CUZD1Q86UP6 607 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 IQCKQ8N0W5 287 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 KIF2BQ8N4N8 673 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 BANPQ8N9N5 519 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 ANKRD9Q96BM1 317 aaPredicted RBP9.12□□□□□ -0.95
YBX3-212ENST00000542002 C19orf60Q96EN9 201 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 KCNA7Q96RP8 456 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 LMF1Q96S06 567 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 HBEGFQ99075 208 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 TMEM109Q9BVC6 243 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 ROPN1BQ9BZX4 212 aaPredicted RBP9.12□□□□□ -0.95
YBX3-212ENST00000542002 ROPN1Q9HAT0 212 aaPredicted RBP9.12□□□□□ -0.95
YBX3-212ENST00000542002 LYRM4Q9HD34 91 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 FBXW2Q9UKT8 454 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 GRID1Q9ULK0 1009 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 PLLPQ9Y342 182 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 ATG4BQ9Y4P1 393 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 ASB4Q9Y574 426 aa9.12□□□□□ -0.95
YBX3-212ENST00000542002 HEMK1Q9Y5R4 338 aaPredicted RBP9.12□□□□□ -0.95
YBX3-212ENST00000542002 A0A0A6YYD5 115 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 A0A1W2PR48 441 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 A8MUI8 341 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 PSMD12O00232 456 aaPredicted RBP9.11□□□□□ -0.95
YBX3-212ENST00000542002 MANBAO00462 879 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 COPEO14579 308 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 PROM1O43490 865 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 DPM1O60762 260 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 CTNSO60931 367 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 LDB3O75112 727 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 GLRA3O75311 464 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 SPAG7O75391 227 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 OTCP00480 354 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 ICAM2P13598 275 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 CPA3P15088 417 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 ARL1P40616 181 aaPredicted RBP9.11□□□□□ -0.95
YBX3-212ENST00000542002 SSR2P43308 183 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 GPR143P51810 404 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 NAGLUP54802 743 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 FOXA1P55317 472 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 HNRNPH2P55795 449 aaKnown RBP9.11□□□□□ -0.95
YBX3-212ENST00000542002 HSD17B7P56937 341 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 SLC26A5P58743 744 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 ID2Q02363 134 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 TGM3Q08188 693 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 TBL3Q12788 808 aaKnown RBP9.11□□□□□ -0.95
YBX3-212ENST00000542002 SLC13A2Q13183 592 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 MFAP5Q13361 173 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 MRM1Q6IN84 353 aaKnown RBP9.11□□□□□ -0.95
YBX3-212ENST00000542002 ISLR2Q6UXK2 745 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 DGAT2L6Q6ZPD8 337 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 RIPOR1Q6ZS17 1223 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 Q6ZS92 163 aa9.11□□□□□ -0.95
YBX3-212ENST00000542002 SLC22A9Q8IVM8 553 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms