RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-211	ENST00000541687	KCNK12	Q9HB15	430 aa		13.91	□□□□□ -0.18
GCFC2-211	ENST00000541687	INTS6	Q9UL03	887 aa	Known RBP	13.91	□□□□□ -0.18
GCFC2-211	ENST00000541687	QSER1	Q2KHR3	1735 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	FUOM	A2VDF0	154 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	LRRC72	A6NJI9	287 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	GABRR3	A8MPY1	467 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	CDRT1	O95170	752 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	ZNF10	P21506	573 aa	Predicted RBP	13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	SLC15A1	P46059	708 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	HTRA3	P83110	453 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	PRR5	P85299	388 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	VLDLR	P98155	873 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	RGN	Q15493	299 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	LIMS2	Q7Z4I7	341 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	CCDC116	Q8IYX3	515 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	HMGCLL1	Q8TB92	370 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	AP3S1	Q92572	193 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	RERG	Q96A58	199 aa	Predicted RBP	13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	IKZF5	Q9H5V7	419 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	MAGIX	Q9H6Y5	334 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	ING3	Q9NXR8	418 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	ING4	Q9UNL4	249 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	CARNS1	A5YM72	827 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	GPR68	Q15743	365 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	SLC14A2	Q15849	920 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	DLEU7	Q6UYE1	221 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	ZNF438	Q7Z4V0	828 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	TRAM1L1	Q8N609	369 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	LINC01599	Q8WXQ3	324 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	RGMA	Q96B86	450 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	TRIB3	Q96RU7	358 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	MGLL	Q99685	303 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	RETREG1	Q9H6L5	497 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	DYRK3	O43781	588 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	PRMT3	O60678	531 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	HTR1B	P28222	390 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	ALDH3B2	P48448	385 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	SCN1B	Q07699	218 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	GPR149	Q86SP6	731 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	CADM2	Q8N3J6	435 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	RASSF5	Q8WWW0	418 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	ZNF385D	Q9H6B1	395 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	SACM1L	Q9NTJ5	587 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	FAIM	Q9NVQ4	179 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	P2RX2	Q9UBL9	471 aa		13.9	□□□□□ -0.18
GCFC2-211	ENST00000541687	PCSK2	P16519	638 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	SYN1	P17600	705 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	AOAH	P28039	575 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	NKX2-5	P52952	324 aa	Predicted RBP	13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	OR2B6	P58173	313 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	XKR7	Q5GH72	579 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	LIPK	Q5VXJ0	399 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	IL1RAP	Q9NPH3	570 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	S100A1	P23297	94 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	TIE1	P35590	1138 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	STAT5A	P42229	794 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	PSMD4	P55036	377 aa	Known RBP	13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	ID2	Q02363	134 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	ACVR1	Q04771	509 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	IKBIP	Q70UQ0	350 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	MEX3D	Q86XN8	651 aa	Known RBP	13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	OR10H4	Q8NGA5	316 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	PIGX	Q8TBF5	258 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	ASB11	Q8WXH4	323 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	SMPDL3A	Q92484	453 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	TRPV5	Q9NQA5	729 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	FGF19	O95750	216 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	PRKAR1A	P10644	381 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	RORC	P51449	518 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	SUOX	P51687	545 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	POMZP3	Q6PJE2	187 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	CEP68	Q76N32	757 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	ZSWIM9	Q86XI8	627 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	PDCD10	Q9BUL8	212 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	CARS2	Q9HA77	564 aa	Known RBP	13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	PDF	Q9HBH1	243 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	ERVK13-1	Q9NX77	482 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	SARDH	Q9UL12	918 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	TCEAL8	Q8IYN2	117 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	PDLIM5	Q96HC4	596 aa	Known RBP	13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	ASPN	Q9BXN1	380 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	SP140L	Q9H930	580 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	CCL26	Q9Y258	94 aa		13.89	□□□□□ -0.19
GCFC2-211	ENST00000541687	FAM92A	A1XBS5	289 aa		13.88	□□□□□ -0.19
GCFC2-211	ENST00000541687	ZNF311	Q5JNZ3	666 aa		13.88	□□□□□ -0.19
GCFC2-211	ENST00000541687	C6orf183	Q5T699	404 aa		13.88	□□□□□ -0.19
GCFC2-211	ENST00000541687	FAM98A	Q8NCA5	519 aa	Known RBP	13.88	□□□□□ -0.19
GCFC2-211	ENST00000541687	PIP5K1A	Q99755	562 aa		13.88	□□□□□ -0.19
GCFC2-211	ENST00000541687	MAPKAP1	Q9BPZ7	522 aa		13.88	□□□□□ -0.19
GCFC2-211	ENST00000541687	TMED9	Q9BVK6	235 aa		13.88	□□□□□ -0.19
GCFC2-211	ENST00000541687	TTLL2	Q9BWV7	592 aa		13.88	□□□□□ -0.19
GCFC2-211	ENST00000541687	UBE2QL1	A1L167	161 aa		13.88	□□□□□ -0.19
GCFC2-211	ENST00000541687	CHURC1-FNTB	B4DL54	471 aa		13.88	□□□□□ -0.19
GCFC2-211	ENST00000541687	RLN1	P04808	185 aa		13.88	□□□□□ -0.19
GCFC2-211	ENST00000541687	APOD	P05090	189 aa		13.88	□□□□□ -0.19
GCFC2-211	ENST00000541687	HMGA1	P17096	107 aa	Known RBP	13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms