RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, human

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-210	ENST00000540975	LCE3E	Q5T5B0	92 aa		4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	KRTAP5-1	Q6L8H4	278 aa		4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	VIT	Q6UXI7	678 aa		4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	BANP	Q8N9N5	519 aa		4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	OR4Q3	Q8NH05	313 aa		4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	CCM2	Q9BSQ5	444 aa		4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	MTIF3	Q9H2K0	278 aa	Known RBP	4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	MARCH7	Q9H992	704 aa		4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	NRBP1	Q9UHY1	535 aa		4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	TRIM49B	A6NDI0	452 aa		4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	SERINC4	A6NH21	518 aa		4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	IFIT3	O14879	490 aa	Known RBP	4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	GRAP2	O75791	330 aa		4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	HSP90AA1	P07900	732 aa	Known RBP	4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	SOAT1	P35610	550 aa		4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	ANP32A	P39687	249 aa	Known RBP	4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	CEACAM7	Q14002	265 aa		4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	TMEM44	Q2T9K0	475 aa		4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	MUC21	Q5SSG8	566 aa		4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	ADCK1	Q86TW2	530 aa		4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	TBC1D10C	Q8IV04	446 aa		4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	OR13C5	Q8NGS8	318 aa		4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	LIPH	Q8WWY8	451 aa		4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	ATG101	Q9BSB4	218 aa		4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	TRIM7	Q9C029	511 aa		4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	ITGA11	Q9UKX5	1188 aa		4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	SPATA2	Q9UM82	520 aa		4.6	□□□□□ -1.67
YBX3-210	ENST00000540975	YDJC	A8MPS7	323 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	KBTBD13	C9JR72	458 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	FBP2	O00757	339 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	SLC30A4	O14863	429 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	ST8SIA3	O43173	380 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	FAM200B	P0CF97	657 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	SCG2	P13521	617 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	ELK3	P41970	407 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	SSR1	P43307	286 aa	Known RBP	4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	FKBP1B	P68106	108 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	GPR50	Q13585	617 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	ECSCR	Q19T08	205 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	CCDC184	Q52MB2	194 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	PM20D1	Q6GTS8	502 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	CASC4	Q6P4E1	433 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	DCLRE1A	Q6PJP8	1040 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	SIX6OS1	Q8N1H7	587 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	GPD1L	Q8N335	351 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	ELMOD1	Q8N336	334 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	UXS1	Q8NBZ7	420 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	RHOXF1	Q8NHV9	184 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	AGAP11	Q8TF27	550 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	PCNP	Q8WW12	178 aa	Known RBP	4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	CKAP2	Q8WWK9	683 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	SEPT8	Q92599	483 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	CORO2A	Q92828	525 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	RCHY1	Q96PM5	261 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	C17orf62	Q9BQA9	187 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	VIPAS39	Q9H9C1	493 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	ZCCHC17	Q9NP64	241 aa	Known RBP	4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	MRPL17	Q9NRX2	175 aa	Known RBP	4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	SLCO1C1	Q9NYB5	712 aa		4.59	□□□□□ -1.67
YBX3-210	ENST00000540975	RALGAPA1	Q6GYQ0	2036 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975		A0A1B0GTH9	108 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	LOC390937	A0A1W2PQ73	354 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	CTDSPL	O15194	276 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	TBCA	O75347	108 aa	Known RBP	4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	HSPA4L	O95757	839 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	IER3	P46695	156 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	RPS27A	P62979	156 aa	Known RBP	4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	MAP2K1	Q02750	393 aa	Predicted RBP	4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	RFTN2	Q52LD8	501 aa	Predicted RBP	4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	ZNF506	Q5JVG8	444 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	MPP7	Q5T2T1	576 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	RNLS	Q5VYX0	342 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	ZNF776	Q68DI1	518 aa	Predicted RBP	4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	PET117	Q6UWS5	81 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	HIPK1	Q86Z02	1210 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	LRRC49	Q8IUZ0	686 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	SMYD1	Q8NB12	490 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	C8orf46	Q8TAG6	207 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	FAM162A	Q96A26	154 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	ANKRD27	Q96NW4	1050 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	PARK7	Q99497	189 aa	Known RBP	4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	RAI14	Q9P0K7	980 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	ZNF346	Q9UL40	294 aa	Known RBP	4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	SH3GLB1	Q9Y371	365 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	TMED7	Q9Y3B3	224 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	POMT1	Q9Y6A1	747 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	FER1L5	A0AVI2	2057 aa		4.58	□□□□□ -1.68
YBX3-210	ENST00000540975	SRRM4	A7MD48	611 aa	Known RBP	4.57	□□□□□ -1.68
YBX3-210	ENST00000540975		M0R296	226 aa		4.57	□□□□□ -1.68
YBX3-210	ENST00000540975	VENTX	O95231	258 aa		4.57	□□□□□ -1.68
YBX3-210	ENST00000540975	CAST	P20810	708 aa	Known RBP	4.57	□□□□□ -1.68
YBX3-210	ENST00000540975	CCND3	P30281	292 aa	Predicted RBP	4.57	□□□□□ -1.68
YBX3-210	ENST00000540975	KCNJ1	P48048	391 aa		4.57	□□□□□ -1.68
YBX3-210	ENST00000540975	TDO2	P48775	406 aa		4.57	□□□□□ -1.68
YBX3-210	ENST00000540975	TSPY1	Q01534	308 aa		4.57	□□□□□ -1.68
YBX3-210	ENST00000540975	POU5F1	Q01860	360 aa	Known RBP	4.57	□□□□□ -1.68
YBX3-210	ENST00000540975	SCN1B	Q07699	218 aa		4.57	□□□□□ -1.68
YBX3-210	ENST00000540975	CYLC2	Q14093	348 aa	Predicted RBP	4.57	□□□□□ -1.68
YBX3-210	ENST00000540975	PSMD6	Q15008	389 aa		4.57	□□□□□ -1.68
YBX3-210	ENST00000540975	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.57	□□□□□ -1.68

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