RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 IGHG3P01860 377 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 OR56A5P0C7T3 313 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 PKMP14618 531 aaKnown RBP4.28□□□□□ -1.72
SNHG1-214ENST00000540865 GABRA1P14867 456 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 CMPK1P30085 196 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 ADRA1AP35348 466 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 RFC3P40938 356 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 NR2C2P49116 596 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 CDKN1CP49918 316 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-214ENST00000540865 ASCL1P50553 236 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 GEMP55040 296 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 MLF1P58340 268 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 SLC26A5P58743 744 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 TAS2R40P59535 323 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 MPP1Q00013 466 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 MAT1AQ00266 395 aaKnown RBP4.28□□□□□ -1.72
SNHG1-214ENST00000540865 SORDQ00796 357 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 RELAQ04206 551 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 KLHL30Q0D2K2 578 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 USP10Q14694 798 aaKnown RBP4.28□□□□□ -1.72
SNHG1-214ENST00000540865 MESDQ14696 234 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 HSPB2Q16082 182 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 NDUFA9Q16795 377 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 HKDC1Q2TB90 917 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 MINDY4Q4G0A6 757 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 FILIP1LQ4L180 1135 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 SFT2D3Q587I9 215 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 C1orf185Q5T7R7 199 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 MFSD4BQ5TF39 518 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 KAZNQ674X7 775 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 RTL6Q6ICC9 239 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 ZNF585AQ6P3V2 769 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 LRRC8BQ6P9F7 803 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 TTC23LQ6PF05 361 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 PAPD4Q6PIY7 484 aaKnown RBP4.28□□□□□ -1.72
SNHG1-214ENST00000540865 PACS1Q6VY07 963 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 PID1Q7Z2X4 250 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 YTHDF3Q7Z739 585 aaKnown RBP4.28□□□□□ -1.72
SNHG1-214ENST00000540865 TAX1BP1Q86VP1 789 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 KIF18BQ86Y91 864 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 PIANPQ8IYJ0 282 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 ZNF567Q8N184 647 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 RAB42Q8N4Z0 105 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 PLPP5Q8NEB5 264 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 OR5M9Q8NGP3 310 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 OR2A1Q8NGT9 310 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 MCOLN3Q8TDD5 553 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 TFB1MQ8WVM0 346 aaKnown RBP4.28□□□□□ -1.72
SNHG1-214ENST00000540865 ASZ1Q8WWH4 475 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 PIGTQ969N2 578 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 RERGQ96A58 199 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-214ENST00000540865 RAD51AP1Q96B01 352 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 ZBTB8AQ96BR9 441 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 SPATA13Q96N96 652 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 SMC6Q96SB8 1091 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 SH3GL2Q99962 352 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 DPH7Q9BTV6 452 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 ATG10Q9H0Y0 220 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 DEFB127Q9H1M4 99 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 ZDHHC11Q9H8X9 412 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 H2AFY2Q9P0M6 372 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-214ENST00000540865 MTRF1LQ9UGC7 380 aaKnown RBP4.28□□□□□ -1.72
SNHG1-214ENST00000540865 RSPH14Q9UHP6 348 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 FEZ2Q9UHY8 353 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-214ENST00000540865 MRFAP1Q9Y605 127 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 PRSS21Q9Y6M0 314 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 PMF1-BGLAPU3KQ54 211 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 HCFC1P51610 2035 aa4.28□□□□□ -1.73
SNHG1-214ENST00000540865 ARID1AO14497 2285 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 A0A1W2PPV9 198 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 FEZF1A0PJY2 475 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 TRIM64A6NGJ6 449 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 TRIM64BA6NI03 449 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 ARHGEF33A8MVX0 844 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 MAGEB17A8MXT2 336 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 CCL22O00626 93 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 CLDN4O14493 209 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 DVL2O14641 736 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 NRP2O60462 931 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 NSA2O95478 260 aaKnown RBP4.27□□□□□ -1.73
SNHG1-214ENST00000540865 HRGP04196 525 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 PRSS56P0CW18 603 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 EZRP15311 586 aaKnown RBP4.27□□□□□ -1.73
SNHG1-214ENST00000540865 IL10P22301 178 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 PSMA3P25788 255 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 PSMB5P28074 263 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 CCR7P32248 378 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 XCR1P46094 333 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 MASP1P48740 699 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 UBE2HP62256 183 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 PPIAP62937 165 aaKnown RBP4.27□□□□□ -1.73
SNHG1-214ENST00000540865 IRF9Q00978 393 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 MEF2AQ02078 507 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-214ENST00000540865 HSPA14Q0VDF9 509 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 ABRAXAS2Q15018 415 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 NSDHLQ15738 373 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 ZNF385BQ569K4 471 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 WLSQ5T9L3 541 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 NDUFAF5Q5TEU4 345 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 CD276Q5ZPR3 534 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms