RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CHI3L1P36222 383 aaPredicted RBP11.75□□□□□ -0.53
NPC1-202ENST00000540608 PREPP48147 710 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 MC1RQ01726 317 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 GANABQ14697 944 aaKnown RBP11.75□□□□□ -0.53
NPC1-202ENST00000540608 SLC5A12Q1EHB4 618 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 MPEG1Q2M385 716 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 RSBN1Q5VWQ0 802 aaPredicted RBP11.75□□□□□ -0.53
NPC1-202ENST00000540608 ZNF770Q6IQ21 691 aaPredicted RBP11.75□□□□□ -0.53
NPC1-202ENST00000540608 Q6ZVL8 140 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 ARMCX6Q7L4S7 300 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 COMMD6Q7Z4G1 85 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 MMAAQ8IVH4 418 aaKnown RBP11.75□□□□□ -0.53
NPC1-202ENST00000540608 SLC39A11Q8N1S5 342 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 TRAM1L1Q8N609 369 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 FAM46DQ8NEK8 389 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 WRAP53Q9BUR4 548 aaKnown RBP11.75□□□□□ -0.53
NPC1-202ENST00000540608 SLC25A19Q9HC21 320 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 ERVK13-1Q9NX77 482 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 SLC25A13Q9UJS0 675 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 TRBC2A0A5B9 178 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 SLC5A10A0PJK1 596 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 GBAP04062 536 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 SCG5P05408 212 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 KRT8P05787 483 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 ARAFP10398 606 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 MAPK9P45984 424 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 OR2B6P58173 313 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 RHAGQ02094 409 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 C2orf80Q0P641 193 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 TP53BP2Q13625 1128 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 DOC2BQ14184 412 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 ZNF544Q6NX49 715 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 TMPRSS11BQ86T26 416 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 KRT73Q86Y46 540 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 UBQLNLQ8IYU4 475 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 Q8N9G6 341 aaPredicted RBP11.75□□□□□ -0.53
NPC1-202ENST00000540608 SETD6Q8TBK2 473 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 C16orf78Q8WTQ4 265 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 OPALINQ96PE5 141 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 VPS35Q96QK1 796 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 SMG9Q9H0W8 520 aaKnown RBP11.75□□□□□ -0.53
NPC1-202ENST00000540608 NMNAT1Q9HAN9 279 aaPredicted RBP11.75□□□□□ -0.53
NPC1-202ENST00000540608 FZD3Q9NPG1 666 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 DYRK4Q9NR20 520 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 C14orf119Q9NWQ9 140 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 TAS2R9Q9NYW1 312 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 ANGPT4Q9Y264 503 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 WBP11Q9Y2W2 641 aaKnown RBP11.75□□□□□ -0.53
NPC1-202ENST00000540608 H3BQ06 376 aaPredicted RBP11.74□□□□□ -0.53
NPC1-202ENST00000540608 SSX4O60224 188 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 KLHL18O94889 574 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 KRT75O95678 551 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 URODP06132 367 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 ETV3P41162 512 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 HTR3AP46098 478 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 COPZ1P61923 177 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 BCL7AQ4VC05 210 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 FAM71E1Q6IPT2 247 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 BRAT1Q6PJG6 821 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 TMC5Q6UXY8 1006 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 GDPGP1Q6ZNW5 385 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 SLC30A8Q8IWU4 369 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 LILRA3Q8N6C8 439 aaPredicted RBP11.74□□□□□ -0.53
NPC1-202ENST00000540608 RASGEF1AQ8N9B8 481 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 MRPS31Q92665 395 aaKnown RBP11.74□□□□□ -0.53
NPC1-202ENST00000540608 TMCO6Q96DC7 493 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 WDR34Q96EX3 536 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 ZNF558Q96NG5 402 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 OR2A14Q96R47 310 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 CNPPD1Q9BV87 410 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 RIOK2Q9BVS4 552 aaKnown RBP11.74□□□□□ -0.53
NPC1-202ENST00000540608 ASPNQ9BXN1 380 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 SMURF1Q9HCE7 757 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 TRIM39Q9HCM9 518 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 HHATLQ9HCP6 504 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 RAB23Q9ULC3 237 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 TBC1D24Q9ULP9 559 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 DSPPQ9NZW4 1301 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 TEX28O15482 410 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 ATG13O75143 517 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 UGT2B17O75795 530 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 RECKO95980 971 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 IFNW1P05000 195 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 CTSAP10619 480 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 TCEA1P23193 301 aaKnown RBP11.74□□□□□ -0.53
NPC1-202ENST00000540608 CSTF2P33240 577 aaKnown RBP eCLIP11.74□□□□□ -0.53
NPC1-202ENST00000540608 RPS19P39019 145 aaKnown RBP11.74□□□□□ -0.53
NPC1-202ENST00000540608 CTSCP53634 463 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 SNRPGP62308 76 aaKnown RBP11.74□□□□□ -0.53
NPC1-202ENST00000540608 LRRC26Q2I0M4 334 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 HENMT1Q5T8I9 393 aaKnown RBP11.74□□□□□ -0.53
NPC1-202ENST00000540608 Q6ZVU0 165 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 LAS2Q8IYD9 372 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 OR8H2Q8N162 312 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 GALNT6Q8NCL4 622 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 OR6F1Q8NGZ6 308 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 OR5AK3PQ8NH89 298 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 WDR48Q8TAF3 677 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 BTN2A2Q8WVV5 523 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 FOPNLQ96NB1 174 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms