RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 TTC29Q8NA56 475 aaPredicted RBP9.09□□□□□ -0.95
CLIP1-214ENST00000540539 UXS1Q8NBZ7 420 aa9.09□□□□□ -0.95
CLIP1-214ENST00000540539 OR1S1Q8NH92 325 aa9.09□□□□□ -0.95
CLIP1-214ENST00000540539 HIST1H2AHQ96KK5 128 aa9.09□□□□□ -0.95
CLIP1-214ENST00000540539 LGMNQ99538 433 aa9.09□□□□□ -0.95
CLIP1-214ENST00000540539 BARD1Q99728 777 aaKnown RBP9.09□□□□□ -0.95
CLIP1-214ENST00000540539 HIST1H2AJQ99878 128 aa9.09□□□□□ -0.95
CLIP1-214ENST00000540539 SPATC1LQ9H0A9 340 aa9.09□□□□□ -0.95
CLIP1-214ENST00000540539 POMKQ9H5K3 350 aa9.09□□□□□ -0.95
CLIP1-214ENST00000540539 RNF146Q9NTX7 359 aa9.09□□□□□ -0.95
CLIP1-214ENST00000540539 MRTO4Q9UKD2 239 aaKnown RBP9.09□□□□□ -0.95
CLIP1-214ENST00000540539 SLC39A10Q9ULF5 831 aa9.09□□□□□ -0.95
CLIP1-214ENST00000540539 TBX20Q9UMR3 447 aa9.09□□□□□ -0.95
CLIP1-214ENST00000540539 GPR45Q9Y5Y3 372 aa9.09□□□□□ -0.95
CLIP1-214ENST00000540539 C7orf66A4D0T2 115 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 FAM221BA6H8Z2 402 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 ANXA2P2A6NMY6 339 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 E9PI62 339 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 MEIS2O14770 477 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 HOXC4P09017 264 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-214ENST00000540539 RAC2P15153 192 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 SAT1P21673 171 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 TM4SF4P48230 202 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 GNG10P50151 68 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 HNRNPKP61978 463 aaKnown RBP eCLIP9.08□□□□□ -0.96
CLIP1-214ENST00000540539 TSPAN5P62079 268 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 TSTQ16762 297 aaKnown RBP9.08□□□□□ -0.96
CLIP1-214ENST00000540539 ZNF648Q5T619 568 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-214ENST00000540539 TMEM270Q6UE05 265 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 Q8N402 240 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 EFHBQ8N7U6 833 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 ZNF511Q8NB15 262 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 MOSPD2Q8NHP6 518 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 SCRN2Q96FV2 425 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 TMEM43Q9BTV4 400 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 MCOLN1Q9GZU1 580 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 AKTIPQ9H8T0 292 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 ACTR8Q9H981 624 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 EXOSC4Q9NPD3 245 aaKnown RBP9.08□□□□□ -0.96
CLIP1-214ENST00000540539 DLL4Q9NR61 685 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 VSX1Q9NZR4 365 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-214ENST00000540539 A0A0U1RQF3 1178 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 MEX3AA1L020 520 aaKnown RBP9.08□□□□□ -0.96
CLIP1-214ENST00000540539 ISM1B1AKI9 464 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 GPR31O00270 319 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 UBXN7O94888 489 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 C22orf31O95567 290 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 RECKO95980 971 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 GLUD1P00367 558 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 PDHA2P29803 388 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 HOXA13P31271 388 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-214ENST00000540539 CASP2P42575 452 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 CRHR2Q13324 411 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 DOC2BQ14184 412 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 TKFCQ3LXA3 575 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 MANEAQ5SRI9 462 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 SCYL2Q6P3W7 929 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 LRRC8DQ7L1W4 858 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 TGIF2LXQ8IUE1 241 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 ADHFE1Q8IWW8 467 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 DAW1Q8N136 415 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 TMIEQ8NEW7 156 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 JOSD2Q8TAC2 188 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 DTD1Q8TEA8 209 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 TMEM174Q8WUU8 243 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 RHBDF1Q96CC6 855 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 SCMH1Q96GD3 660 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 RAD9AQ99638 391 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 MYOCQ99972 504 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 LRRC3Q9BY71 257 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 ELAC1Q9H777 363 aaKnown RBP9.08□□□□□ -0.96
CLIP1-214ENST00000540539 NT5DC2Q9H857 520 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 TAS2R16Q9NYV7 291 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 GDE1Q9NZC3 331 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 MBD1Q9UIS9 605 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-214ENST00000540539 CA14Q9ULX7 337 aa9.08□□□□□ -0.96
CLIP1-214ENST00000540539 OR2W5A6NFC9 320 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 PHYHO14832 338 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 NBNO60934 754 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 SDC3O75056 442 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 ICOSLGO75144 302 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 STX11O75558 287 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 SOX30O94993 753 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 C1RP00736 705 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 SERPINA1P01009 418 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 STSP08842 583 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 SLC35E2BP0CK96 405 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 NFKB1P19838 968 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 CSRP3P50461 194 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 LRRC32Q14392 662 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 HABP2Q14520 560 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-214ENST00000540539 SSX1Q16384 188 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 MAPKAPK3Q16644 382 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 THEM4Q5T1C6 240 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 CD276Q5ZPR3 534 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 KANK2Q63ZY3 851 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 FAM198BQ6UWH4 519 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 NUDT13Q86X67 352 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 PUSL1Q8N0Z8 303 aaKnown RBP9.07□□□□□ -0.96
CLIP1-214ENST00000540539 SPATA6LQ8N4H0 392 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms