RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 ACER2Q5QJU3 275 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 HIST2H2AA3Q6FI13 130 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 FAM198BQ6UWH4 519 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 NRG4Q8WWG1 115 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 HDAC10Q969S8 669 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 GTPBP3Q969Y2 492 aaKnown RBP7.2□□□□□ -1.26
GNE-205ENST00000539815 VPS39Q96JC1 886 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 IL17FQ96PD4 163 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 RBCK1Q9BYM8 510 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 PCBD2Q9H0N5 130 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 TFB2MQ9H5Q4 396 aaKnown RBP7.2□□□□□ -1.26
GNE-205ENST00000539815 WDR54Q9H977 334 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 CATSPERZQ9NTU4 200 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 CTSFQ9UBX1 484 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 PPIL1Q9Y3C6 166 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 COL4A2P08572 1712 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 TLN2Q9Y4G6 2542 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 TRIM77I1YAP6 450 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 DLX3O60479 287 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 WDPCPO95876 746 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 ZNF3P17036 446 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 BMP7P18075 431 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 STT3AP46977 705 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 RPP38P78345 283 aaKnown RBP7.2□□□□□ -1.26
GNE-205ENST00000539815 RHAGQ02094 409 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 SLC13A2Q13183 592 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 SNTA1Q13424 505 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 ACAP2Q15057 778 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 TCEAL1Q15170 157 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 Q71RC1 249 aaPredicted RBP7.2□□□□□ -1.26
GNE-205ENST00000539815 TICAM1Q8IUC6 712 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 ANKRD53Q8N9V6 530 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 ARRDC2Q8TBH0 407 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 ELAC2Q9BQ52 826 aaKnown RBP7.2□□□□□ -1.26
GNE-205ENST00000539815 DEFB127Q9H1M4 99 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 CDCP1Q9H5V8 836 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 MCCC2Q9HCC0 563 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 DRG1Q9Y295 367 aaKnown RBP7.2□□□□□ -1.26
GNE-205ENST00000539815 K7EPI3 171 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 SMAD7O15105 426 aaKnown RBP7.2□□□□□ -1.26
GNE-205ENST00000539815 PHF2O75151 1096 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 BRAFP15056 766 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 PRKCAP17252 672 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 XCR1P46094 333 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 TPD52P55327 224 aaPredicted RBP7.2□□□□□ -1.26
GNE-205ENST00000539815 GALNT1Q10472 559 aaPredicted RBP7.2□□□□□ -1.26
GNE-205ENST00000539815 MFSD7Q6UXD7 560 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 CDHR3Q6ZTQ4 885 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 OR4L1Q8NH43 312 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 SLC35G2Q8TBE7 412 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 CAPSLQ8WWF8 208 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 MAML1Q92585 1016 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 SCARF2Q96GP6 870 aaPredicted RBP7.2□□□□□ -1.26
GNE-205ENST00000539815 MOGAT1Q96PD6 335 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 FAM111AQ96PZ2 611 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 OSBPL8Q9BZF1 889 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 CLEC4MQ9H2X3 399 aaPredicted RBP7.2□□□□□ -1.26
GNE-205ENST00000539815 MRPL39Q9NYK5 338 aaKnown RBP7.2□□□□□ -1.26
GNE-205ENST00000539815 NDUFA13Q9P0J0 144 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 STOML1Q9UBI4 398 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 TAC3Q9UHF0 121 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 AP3M1Q9Y2T2 418 aa7.2□□□□□ -1.26
GNE-205ENST00000539815 MPDZO75970 2070 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 SORBS2O94875 1100 aaKnown RBP7.19□□□□□ -1.26
GNE-205ENST00000539815 PGM3O95394 542 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 STSP08842 583 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 SNRPAP09012 282 aaKnown RBP7.19□□□□□ -1.26
GNE-205ENST00000539815 TMEM253P0C7T8 217 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 DBTP11182 482 aaKnown RBP7.19□□□□□ -1.26
GNE-205ENST00000539815 RBL1P28749 1068 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 ZFP36L2P47974 494 aaKnown RBP7.19□□□□□ -1.26
GNE-205ENST00000539815 PRLHRP49683 370 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 POU6F2P78424 691 aaPredicted RBP7.19□□□□□ -1.26
GNE-205ENST00000539815 IFITM2Q01629 132 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 NPTX1Q15818 432 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 ZNF630Q2M218 657 aaPredicted RBP7.19□□□□□ -1.26
GNE-205ENST00000539815 NDUFAF5Q5TEU4 345 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 GARNL3Q5VVW2 1013 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 KIAA0930Q6ICG6 404 aaPredicted RBP7.19□□□□□ -1.26
GNE-205ENST00000539815 RAD9BQ6WBX8 426 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 PPP1R32Q7Z5V6 425 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 ZZZ3Q8IYH5 903 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 PLD5Q8N7P1 536 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 POGLUT1Q8NBL1 392 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 ACTL9Q8TC94 416 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 MRPL1Q9BYD6 325 aaKnown RBP7.19□□□□□ -1.26
GNE-205ENST00000539815 RAB6BQ9NRW1 208 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 COL5A1P20908 1838 aaPredicted RBP7.19□□□□□ -1.26
GNE-205ENST00000539815 A0A087X0T9 212 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 SYCE1LA8MT33 242 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 FAM228BP0C875 321 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 COMTP21964 271 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 PSMA3P25788 255 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 VHLP40337 213 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 ENTPD1P49961 510 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 COPS2P61201 443 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 KPNB1Q14974 876 aaKnown RBP7.19□□□□□ -1.26
GNE-205ENST00000539815 ZNF124Q15973 351 aa7.19□□□□□ -1.26
GNE-205ENST00000539815 SHQ1Q6PI26 577 aaKnown RBP7.19□□□□□ -1.26
GNE-205ENST00000539815 IGFL3Q6UXB1 125 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms