RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 KIAA1143Q96AT1 154 aaPredicted RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF689Q96CS4 500 aaPredicted RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 MRGPRX2Q96LB1 330 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 SLC6A15Q9H2J7 730 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF451Q9Y4E5 1061 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 C4AP0C0L4 1744 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 OR6C70A6NIJ9 312 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF821O75541 412 aaPredicted RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 CNTN5O94779 1100 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 PDYNP01213 254 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 FHP07954 510 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 JMJD7P0C870 316 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 SLC15A1P46059 708 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 PREPP48147 710 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 PLP2Q04941 152 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 CARM1Q86X55 608 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 CCDC116Q8IYX3 515 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 CLDN19Q8N6F1 224 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 SMURF1Q9HCE7 757 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 TAS2R10Q9NYW0 307 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 KLHL21Q9UJP4 597 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 BACE2Q9Y5Z0 518 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 TJP1Q07157 1748 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 SHROOM3Q8TF72 1996 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 PROM1O43490 865 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 TYROBPO43914 113 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 LEFTY1O75610 366 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 IQCF3P0C7M6 154 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 FGF3P11487 239 aaPredicted RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 DRD2P14416 443 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 TYRP1P17643 537 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 ACADVLP49748 655 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 PRKCDQ05655 676 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 RAB39AQ14964 217 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 NANOGP8Q6NSW7 305 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 UBE2J2Q8N2K1 259 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 KCNN1Q92952 543 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 FAM129BQ96TA1 746 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 DOHHQ9BU89 302 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 ADAMTS10Q9H324 1103 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 NANOGQ9H9S0 305 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 EIF3FO00303 357 aaPredicted RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 POLR2CP19387 275 aaPredicted RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 FBLP22087 321 aaKnown RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 TIA1P31483 386 aaKnown RBP eCLIP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 AGTR2P50052 363 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 E2F1Q01094 437 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF45Q02386 682 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF33BQ06732 778 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 SPIN3Q5JUX0 258 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 TMEM225Q6GV28 225 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 ASB18Q6ZVZ8 466 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF366Q8N895 744 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 SMG8Q8ND04 991 aaKnown RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 OR5M3Q8NGP4 307 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 HDAC2Q92769 488 aaKnown RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 DAZLQ92904 295 aaKnown RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 GAL3ST1Q99999 423 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 ENY2Q9NPA8 101 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 SCP2D1Q9UJQ7 156 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 E7ESA3 106 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 FARS2O95363 451 aaKnown RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 CH25HO95992 272 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 CHRM5P08912 532 aaPredicted RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 ANXA3P12429 323 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 IFI30P13284 250 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 RHCEP18577 417 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 GABRA3P34903 492 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 HERV-K104P61576 105 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 SCAPQ12770 1279 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 POU4F2Q12837 409 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 ELAVL3Q14576 367 aaKnown RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 ATP6AP1Q15904 470 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 SLC36A3Q495N2 470 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 KIAA0319Q5VV43 1072 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 PLD6Q8N2A8 252 aaKnown RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 WDR92Q96MX6 357 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 TMEM74Q96NL1 305 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 KCNA7Q96RP8 456 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 MCHR1Q99705 422 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 HERC2P3Q9BVR0 1158 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 C1orf226A1L170 272 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 E7EQ34 232 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 TP53I11O14683 189 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 GBAP04062 536 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 C5AR1P21730 350 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 AAK1Q2M2I8 961 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 SCGB2B2Q4G0G5 96 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 SHQ1Q6PI26 577 aaKnown RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 BAIAP2L2Q6UXY1 529 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 TCEANCQ8N8B7 351 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 SPERTQ8NA61 448 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 OR2T33Q8NG76 320 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 C7orf43Q8WVR3 580 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 PMM1Q92871 262 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 FKBP10Q96AY3 582 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 TOR3AQ9H497 397 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 IL23AQ9NPF7 189 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 PCDHGA3Q9Y5H0 932 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 LAMB1P07942 1786 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms