RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 MED27Q6P2C8 311 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ZNF793Q6ZN11 406 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ZNF595Q8IYB9 648 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ZNF473Q8WTR7 871 aaKnown RBP17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 NCLNQ969V3 563 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 RELTQ969Z4 430 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 KCNC2Q96PR1 638 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 MS4A8Q9BY19 250 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 FBXW2Q9UKT8 454 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 MRPS33Q9Y291 106 aaKnown RBP17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 DIDO1Q9BTC0 2240 aaKnown RBP17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 A0A096LPK6 155 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ASPDHA6ND91 283 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SYCE1LA8MT33 242 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 NPIPA5E9PKD4 350 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SAP18O00422 153 aaKnown RBP17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 FCHO1O14526 889 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TGFB1P01137 390 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 IFNA16P05015 189 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CASP2P42575 452 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ALDH6A1Q02252 535 aaKnown RBP17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TERF2Q15554 542 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 PFKFB4Q16877 469 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 FAM83EQ2M2I3 478 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ZNF227Q86WZ6 799 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 MYLK4Q86YV6 388 aaPredicted RBP17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 RNF175Q8N4F7 328 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TEX9Q8N6V9 391 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SREK1Q8WXA9 508 aaKnown RBP17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 UBE2E3Q969T4 207 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 FRMD6Q96NE9 622 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 MAPKAP1Q9BPZ7 522 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ZNF223Q9UK11 482 aaPredicted RBP17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 NPIPA1Q9UND3 350 aa17.79■□□□□ 0.44
TNFRSF1A-212ENST00000539372 LRRC14BA6NHZ5 514 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 GFAPP14136 432 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 EPB42P16452 691 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ATP5A1P25705 553 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 PHBP35232 272 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 HLCSP50747 726 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 RBPJQ06330 500 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 DDX39BQ13838 428 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 E2F2Q14209 437 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 RCN2Q14257 317 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 GRHL2Q6ISB3 625 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 LAS2Q8IYD9 372 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ACOT4Q8N9L9 421 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 NOA1Q8NC60 698 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 FAM98AQ8NCA5 519 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SRFBP1Q8NEF9 429 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 OR7G3Q8NG95 312 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 RHEBL1Q8TAI7 183 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 VMP1Q96GC9 406 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 GPR137Q96N19 417 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TBCDQ9BTW9 1192 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SORBS1Q9BX66 1292 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 OR51B5Q9H339 312 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ACSS3Q9H6R3 686 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 LYRM4Q9HD34 91 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ADAP2Q9NPF8 381 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 KCMF1Q9P0J7 381 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 DMGDHQ9UI17 866 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ANGPTL3Q9Y5C1 460 aa17.78■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CCL21O00585 134 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 PRKNO60260 465 aaPredicted RBP17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 NME2P1O60361 137 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CTNSO60931 367 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 LDB3O75112 727 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 KLHL2O95198 593 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ACSL3O95573 720 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ALDOAP04075 364 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 NME2P22392 152 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TYK2P29597 1187 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TRHRP34981 398 aaPredicted RBP17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CA7P43166 264 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SERPINB8P50452 374 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 GPR143P51810 404 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ID2Q02363 134 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 STX4Q12846 297 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SETDB1Q15047 1291 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ACAP2Q15057 778 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 AP5B1Q2VPB7 878 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TMEM35AQ53FP2 167 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CHSY3Q70JA7 882 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CCDC91Q7Z6B0 441 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 MMGT1Q8N4V1 131 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CPSF7Q8N684 471 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 IFT81Q8WYA0 676 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TMEM125Q96AQ2 219 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CMTM7Q96FZ5 175 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ALOXE3Q9BYJ1 711 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ROGDIQ9GZN7 287 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 VPS11Q9H270 941 aa17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TRIM45Q9H8W5 580 aaPredicted RBP17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 LIN28AQ9H9Z2 209 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 MTRF1LQ9UGC7 380 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 PPIEQ9UNP9 301 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1A-212ENST00000539372 UNC79Q9P2D8 2635 aa17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 ZNHIT1O43257 154 aa17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 SLC19A2O60779 497 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms