RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 SLC13A2Q13183 592 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 BMPR2Q13873 1038 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 TERF2Q15554 542 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 TPSAB1Q15661 275 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 RTL4Q6ZR62 310 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 KRTAP1-3Q8IUG1 177 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 SCUBE1Q8IWY4 988 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 MYO1HQ8N1T3 1032 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 VWA5B2Q8N398 1253 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 ANKRD53Q8N9V6 530 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 FAM47BQ8NA70 645 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 NAXEQ8NCW5 288 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 TMEM52Q8NDY8 209 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 NEIL2Q969S2 332 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 AARSD1Q9BTE6 412 aaKnown RBP13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 AICDAQ9GZX7 198 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 SEMA4BQ9NPR2 832 aaPredicted RBP13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 PRTFDC1Q9NRG1 225 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 MYOTQ9UBF9 498 aa13.54□□□□□ -0.24
CCDC144NL-202ENST00000539177 JMJD1CQ15652 2540 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 TRGV5A0A0B4J1U4 118 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 URADA6NGE7 173 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 FAM47E-STBD1D6RA91 191 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 SYT5O00445 386 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 SUSD5O60279 629 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 HAUS5O94927 633 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 LY6G6DO95868 133 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 HIST1H2AGP0C0S8 130 aaPredicted RBP13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 CCL3P10147 92 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 HIST1H2ADP20671 130 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 SAT1P21673 171 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 PEX19P40855 299 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 KCNJ1P48048 391 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 VPS41P49754 854 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 RGS4P49798 205 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 DCAF7P61962 342 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 BTN3A2P78410 334 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 CCZ1BP86790 482 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 CCZ1P86791 482 aaPredicted RBP13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 REEP5Q00765 189 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 SP140Q13342 867 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 CSHL1Q14406 222 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 SLC10A1Q14973 349 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 RBBP5Q15291 538 aaKnown RBP13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 POU4F3Q15319 338 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 PCBP2Q15366 365 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 SIX1Q15475 284 aaPredicted RBP13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 TRIP13Q15645 432 aaPredicted RBP13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 SEM1Q6ZVN7 128 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 ZNF321PQ8N8H1 164 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 SLC5A11Q8WWX8 675 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 RNASE6Q93091 150 aaKnown RBP13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 KIAA1191Q96A73 305 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 LINGO1Q96FE5 620 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 HIST1H2AHQ96KK5 128 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 DOCK7Q96N67 2140 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 HIST1H2AJQ99878 128 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 DESI2Q9BSY9 194 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 H2AFJQ9BTM1 129 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 NEUROD4Q9HD90 331 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 SACM1LQ9NTJ5 587 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 ARL15Q9NXU5 204 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 PPIEQ9UNP9 301 aaKnown RBP13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 CLDN16Q9Y5I7 305 aa13.53□□□□□ -0.24
CCDC144NL-202ENST00000539177 PABPN1LA6NDY0 278 aaKnown RBP13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 HSPB2A8KAH6 182 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 KDM4EB2RXH2 506 aaPredicted RBP13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 EIF3FO00303 357 aaPredicted RBP13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 ZSCAN12O43309 604 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 ZNF354AO60765 605 aaPredicted RBP13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 GUCA1CO95843 209 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 P04436 131 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 IFNA16P05015 189 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 CCDC175P0C221 793 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 SMIM10L1P0DMW3 83 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 GABRA1P14867 456 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 AHRP35869 848 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 PIGAP37287 484 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 NKX6-1P78426 367 aaPredicted RBP13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 FOXO1Q12778 655 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 KIF5AQ12840 1032 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 RUNX2Q13950 521 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 HSPB2Q16082 182 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 DUPD1Q68J44 220 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 LRRC8EQ6NSJ5 796 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 C4orf22Q6V702 233 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 HSDL2Q6YN16 418 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 STRA8Q7Z7C7 330 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 TMPRSS11BQ86T26 416 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 ULK2Q8IYT8 1036 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 OR56A3Q8NH54 315 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 LINC01560Q8TB33 94 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 LRRC46Q96FV0 321 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 SMIM10Q96HG1 83 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 SLC6A15Q9H2J7 730 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 PLEKHF2Q9H8W4 249 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 CLK4Q9HAZ1 481 aaKnown RBP13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 ADAP2Q9NPF8 381 aa13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 C20orf96Q9NUD7 363 aaPredicted RBP13.52□□□□□ -0.25
CCDC144NL-202ENST00000539177 FBXO5Q9UKT4 447 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms