RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ARFIP1P53367 373 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 HNRNPH2P55795 449 aaKnown RBP13.4□□□□□ -0.26
CD4-208ENST00000538827 INSM1Q01101 510 aaPredicted RBP13.4□□□□□ -0.26
CD4-208ENST00000538827 KLC1Q07866 573 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 SLC9A5Q14940 896 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 MUM1Q2TAK8 710 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 MMEL1Q495T6 779 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 SPANXN4Q5MJ08 99 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 MANEAQ5SRI9 462 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 REP15Q6BDI9 236 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 C19orf48Q6RUI8 117 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 DHRS13Q6UX07 377 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 IKBIPQ70UQ0 350 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 MMP21Q8N119 569 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 ZCCHC7Q8N3Z6 543 aaKnown RBP13.4□□□□□ -0.26
CD4-208ENST00000538827 DTWD1Q8N5C7 304 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 AGBL5Q8NDL9 886 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 OR9A4Q8NGU2 314 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 PROKR1Q8TCW9 393 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 NUDT8Q8WV74 236 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 ZNF501Q96CX3 271 aaPredicted RBP13.4□□□□□ -0.26
CD4-208ENST00000538827 RCN3Q96D15 328 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 SPDL1Q96EA4 605 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 NDC1Q9BTX1 674 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 SLC25A23Q9BV35 468 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 FAIM2Q9BWQ8 316 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 CLMPQ9H6B4 373 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 CUTCQ9NTM9 273 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 OCIAD1Q9NX40 245 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 SIDT1Q9NXL6 827 aaKnown RBP13.4□□□□□ -0.26
CD4-208ENST00000538827 RARRES3Q9UL19 164 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 PCDHGA1Q9Y5H4 931 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 SPTBP11277 2137 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 ANGPT2O15123 496 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 CFLARO15519 480 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 PRMT3O60678 531 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 GALR3O60755 368 aaPredicted RBP13.39□□□□□ -0.27
CD4-208ENST00000538827 GUCY1B2O75343 617 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 CSO75390 466 aaKnown RBP13.39□□□□□ -0.27
CD4-208ENST00000538827 PRKRAO75569 313 aaKnown RBP13.39□□□□□ -0.27
CD4-208ENST00000538827 CAPNS1P04632 268 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 SMIM10L1P0DMW3 83 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 CAPN3P20807 821 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 PRPS1L1P21108 318 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 CALB2P22676 271 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 CPN2P22792 545 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 S100A3P33764 101 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 RPL3P39023 403 aaKnown RBP13.39□□□□□ -0.27
CD4-208ENST00000538827 AVPR1BP47901 424 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 DGKQP52824 942 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 TRA2BP62995 288 aaKnown RBP13.39□□□□□ -0.27
CD4-208ENST00000538827 SKP1P63208 163 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 MC1RQ01726 317 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 ZFP36L1Q07352 338 aaKnown RBP13.39□□□□□ -0.27
CD4-208ENST00000538827 UGT8Q16880 541 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 SPRED3Q2MJR0 410 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 FAM174BQ3ZCQ3 159 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 PRAMEF17Q5VTA0 474 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 GARNL3Q5VVW2 1013 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 FAM71E1Q6IPT2 247 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 TLDC1Q6P9B6 456 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 TTLL10Q6ZVT0 673 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 PDSS2Q86YH6 399 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 TMEM126BQ8IUX1 230 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 FUNDC1Q8IVP5 155 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 FAM47BQ8NA70 645 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 GLB1L3Q8NCI6 653 aaPredicted RBP13.39□□□□□ -0.27
CD4-208ENST00000538827 OR7A2PQ8NGA2 310 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 RP9Q8TA86 221 aaKnown RBP13.39□□□□□ -0.27
CD4-208ENST00000538827 PPCDCQ96CD2 204 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 SMIM10Q96HG1 83 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 NPAS2Q99743 824 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 MAPKAP1Q9BPZ7 522 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 RBCK1Q9BYM8 510 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 STRADBQ9C0K7 418 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 REEP4Q9H6H4 257 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 HCN3Q9P1Z3 774 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 PHF11Q9UIL8 331 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 MAPRE3Q9UPY8 281 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 CLCA2Q9UQC9 943 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 SLC22A7Q9Y694 548 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 SPACA6W5XKT8 324 aa13.39□□□□□ -0.27
CD4-208ENST00000538827 FITM1A5D6W6 292 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 PCNX2A6NKB5 2137 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 BBIP1A8MTZ0 92 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 MRASO14807 208 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 AIM2O14862 343 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 SCELO95171 688 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 AIFM1O95831 613 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 FTH1P19P0C7X4 201 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 NR2F6P10588 404 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 PCSK2P16519 638 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 CCKBRP32239 447 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 GSTM5P46439 218 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 ZFP36L2P47974 494 aaKnown RBP13.38□□□□□ -0.27
CD4-208ENST00000538827 NUDT2P50583 147 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 TNFRSF17Q02223 184 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 BNIP1Q12981 228 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 RUNX2Q13950 521 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 RCAN2Q14206 197 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms