RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 KCNJ9Q92806 393 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 L3HYPDHQ96EM0 354 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 CCDC120Q96HB5 630 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 ZNF597Q96LX8 424 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 TMEM74Q96NL1 305 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 TREX2Q9BQ50 279 aaPredicted RBP6.67□□□□□ -1.34
SORT1-209ENST00000538502 TXLNGYQ9BZA5 131 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 OR10A4Q9H209 315 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 XPNPEP1Q9NQW7 623 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 LIPT1Q9Y234 373 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 LRRC72A6NJI9 287 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 CCKBRP32239 447 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 OPRL1P41146 370 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 SPIN3Q5JUX0 258 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 AGAP6Q5VW22 663 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 GTF2IRD2BQ6EKJ0 949 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 ARHGAP11AQ6P4F7 1023 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 GTF2IRD2Q86UP8 949 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 SVBPQ8N300 66 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 ZNF366Q8N895 744 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 OR1J4Q8NGS1 313 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 POC1BQ8TC44 478 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 LCN9Q8WX39 176 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 THAP4Q8WY91 577 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 SLC41A3Q96GZ6 507 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 BTF3L4Q96K17 158 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 FBXL18Q96ME1 805 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 AGAP4Q96P64 663 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 OR2M2Q96R28 347 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 OR14A2Q96R54 314 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 TWNKQ96RR1 684 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 CORO1BQ9BR76 489 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 GSKIPQ9P0R6 139 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 TMEM233B4DJY2 109 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 CDK4P11802 303 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 TPT1P13693 172 aaKnown RBP6.67□□□□□ -1.34
SORT1-209ENST00000538502 ATP1B2P14415 290 aaPredicted RBP6.67□□□□□ -1.34
SORT1-209ENST00000538502 TUBG1P23258 451 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 OXTRP30559 389 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 RPL35P42766 123 aaKnown RBP6.67□□□□□ -1.34
SORT1-209ENST00000538502 PLA2G16P53816 162 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 GSTM4Q03013 218 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 AKR1C8PQ5T2L2 129 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 C3P1Q6ZMU1 363 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 FAM46BQ96A09 425 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 UQCC2Q9BRT2 126 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 CACNG6Q9BXT2 260 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 ERVK13-1Q9NX77 482 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 ABI3Q9P2A4 366 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 UTS2RQ9UKP6 389 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 KIDINS220Q9ULH0 1771 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 A0A1W2PQ45 241 aaPredicted RBP6.67□□□□□ -1.34
SORT1-209ENST00000538502 A0A1W2PQY0 241 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 HSBP1L1C9JCN9 74 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 NEDD8-MDP1E9PL57 170 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 PRAMEF2O60811 474 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 MMP3P08254 477 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 HCKP08631 526 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 RAB3BP20337 219 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 IL1R2P27930 398 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 SSX2Q16385 188 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 MSS51Q4VC12 460 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 ALG10BQ5I7T1 473 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 OR56A3Q8NH54 315 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 PYCR2Q96C36 320 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 PCED1BQ96HM7 432 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 CDK15Q96Q40 435 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 SLC2A11Q9BYW1 496 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 ATG5Q9H1Y0 275 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 GFOD1Q9NXC2 390 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 ZFR2Q9UPR6 939 aaKnown RBP6.67□□□□□ -1.34
SORT1-209ENST00000538502 PCDHGA8Q9Y5G5 932 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 PCDHGA2Q9Y5H1 932 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 AK1P00568 194 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 THEGLP0DJG4 465 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 VEGFAP15692 232 aaPredicted RBP6.67□□□□□ -1.34
SORT1-209ENST00000538502 S1PR1P21453 382 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 TAGLNQ01995 201 aaKnown RBP6.67□□□□□ -1.34
SORT1-209ENST00000538502 MLLT1Q03111 559 aaPredicted RBP6.67□□□□□ -1.34
SORT1-209ENST00000538502 CARD16Q5EG05 197 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 SPANXN4Q5MJ08 99 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 AGAP7PQ5VUJ5 663 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 C22orf42Q6IC83 251 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 DESI1Q6ICB0 168 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 PARGQ86W56 976 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 DGAT2Q96PD7 388 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 MTERF1Q99551 399 aaKnown RBP6.67□□□□□ -1.34
SORT1-209ENST00000538502 SSX3Q99909 188 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 OSER1Q9NX31 292 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 SLC27A5Q9Y2P5 690 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 CLCA3PQ9Y6N3 262 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 C2orf92A0A1B0GVN3 265 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 CLDN24A6NM45 220 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 LOC730098B7Z3J9 87 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 WNT10BO00744 389 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 FARS2O95363 451 aaKnown RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 PCCBP05166 539 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 LAG3P18627 525 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 PRKACGP22612 351 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 HMGCS1Q01581 520 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms