RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 RAB41Q5JT25 222 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 SLC25A30Q5SVS4 291 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 PRAMEF13Q5VWM6 474 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 GCNT7Q6ZNI0 430 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 RPS27LQ71UM5 84 aaKnown RBP6.42□□□□□ -1.38
USP28-207ENST00000538475 FAM214BQ7L5A3 538 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 C16orf62Q7Z3J2 963 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 GPSM1Q86YR5 675 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 TMC8Q8IU68 726 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 MSRB3Q8IXL7 192 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 ADGRF3Q8IZF5 1079 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 TAGAPQ8N103 731 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 OR8H3Q8N146 312 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 TP53I13Q8NBR0 393 aaPredicted RBP6.42□□□□□ -1.38
USP28-207ENST00000538475 UXS1Q8NBZ7 420 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 CAMKVQ8NCB2 501 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 SLC37A3Q8NCC5 494 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 TMIEQ8NEW7 156 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 OR52K2Q8NGK3 314 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 OR6P1Q8NGX9 317 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 METTL6Q8TCB7 284 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 CLEC4CQ8WTT0 213 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 ADAMTS14Q8WXS8 1223 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 COPS5Q92905 334 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 FUBP1Q96AE4 644 aaKnown RBP6.42□□□□□ -1.38
USP28-207ENST00000538475 COQ8BQ96D53 544 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 RNF31Q96EP0 1072 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 CHFRQ96EP1 664 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 CCDC120Q96HB5 630 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 RPL10LQ96L21 214 aaKnown RBP6.42□□□□□ -1.38
USP28-207ENST00000538475 OR52E6Q96RD3 313 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 KCNA7Q96RP8 456 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 P2RY13Q9BPV8 354 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 KCNS3Q9BQ31 491 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 C19orf43Q9BQ61 176 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 TMEM43Q9BTV4 400 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 SLC6A17Q9H1V8 727 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 MED28Q9H204 178 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 MMP28Q9H239 520 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 PIF1Q9H611 641 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 PPP1R3EQ9H7J1 279 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 GOLGA2P5Q9HBQ8 144 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 LTB4R2Q9NPC1 389 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 SEMA4BQ9NPR2 832 aaPredicted RBP6.42□□□□□ -1.38
USP28-207ENST00000538475 WASH6PQ9NQA3 447 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 THSD1Q9NS62 852 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 FARSBQ9NSD9 589 aaKnown RBP6.42□□□□□ -1.38
USP28-207ENST00000538475 CATSPERZQ9NTU4 200 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 IMP3Q9NV31 184 aaKnown RBP6.42□□□□□ -1.38
USP28-207ENST00000538475 EXD2Q9NVH0 621 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 RBM22Q9NW64 420 aaKnown RBP eCLIP6.42□□□□□ -1.38
USP28-207ENST00000538475 MCUBQ9NWR8 336 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 MIOSQ9NXC5 875 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 VNN3Q9NY84 501 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 SLC25A37Q9NYZ2 338 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 ZNF224Q9NZL3 707 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 CD274Q9NZQ7 290 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 GIMAP2Q9UG22 337 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 GMEB2Q9UKD1 530 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 ZNF490Q9ULM2 529 aaPredicted RBP6.42□□□□□ -1.38
USP28-207ENST00000538475 NCKAP1Q9Y2A7 1128 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 LSM2Q9Y333 95 aaKnown RBP6.42□□□□□ -1.38
USP28-207ENST00000538475 CCL27Q9Y4X3 112 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 PCDHGA2Q9Y5H1 932 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 SNX11Q9Y5W9 270 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 PTCH2Q9Y6C5 1203 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 CDH10Q9Y6N8 788 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 THSD7AQ9UPZ6 1657 aa6.42□□□□□ -1.38
USP28-207ENST00000538475 PLXNA3P51805 1871 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 KIF26AQ9ULI4 1882 aaPredicted RBP6.41□□□□□ -1.38
USP28-207ENST00000538475 GLYATL1P3A0A0U1RQE8 302 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 hCG_1807616A0A1W2PRN6 198 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 PQLC2LA1A4F0 135 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 MPTX1A8MV57 137 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 MYO1GB0I1T2 1018 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 C19orf81C9J6K1 198 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 PIRO00625 290 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 AKR7A2O43488 359 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 SMAD6O43541 496 aaKnown RBP6.41□□□□□ -1.38
USP28-207ENST00000538475 PTP4A3O75365 173 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 CCNB2O95067 398 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 APOL3O95236 402 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 PRAMEF1O95521 474 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 PAHP00439 452 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 IFNA14P01570 189 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 APOC1P02654 83 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 DNTTP04053 509 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 SLC2A2P11168 524 aaPredicted RBP6.41□□□□□ -1.38
USP28-207ENST00000538475 ICAM2P13598 275 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 TYRP14679 529 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 GLULP15104 373 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 CPEP16870 476 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 TSPAN8P19075 237 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 CBLP22681 906 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 EDNRBP24530 442 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 RORAP35398 523 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 MMP12P39900 470 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 HSPA7P48741 367 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 INPP1P49441 399 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 CLCNKAP51800 687 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms