RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 RPH3AQ9Y2J0 694 aaPredicted RBP12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 NCKAP5O14513 1909 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 NSD1Q96L73 2696 aaPredicted RBP12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 MPDZO75970 2070 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 MYOCOSA0A1B0GUC4 107 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 NRDCO43847 1150 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 IGHG3P01860 377 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 KRT14P02533 472 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 IFNA16P05015 189 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 SMIM10L1P0DMW3 83 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 MAN2A2P49641 1150 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 GPR143P51810 404 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 AP1S2P56377 157 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 IL2P60568 153 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 ADAM8P78325 824 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 BMPR2Q13873 1038 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 RUNX2Q13950 521 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 C1orf185Q5T7R7 199 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 FAM47EQ6ZV65 393 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 CDC20BQ86Y33 519 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 GOT1L1Q8NHS2 421 aaPredicted RBP12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 ATL1Q8WXF7 558 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 FBXL8Q96CD0 374 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 SMIM10Q96HG1 83 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 FAR2Q96K12 515 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 SCYL1Q96KG9 808 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 ALPK1Q96QP1 1244 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 AIF1LQ9BQI0 150 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 TRIM54Q9BYV2 358 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 LDAHQ9H6V9 325 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 EXO5Q9H790 373 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 ADAP2Q9NPF8 381 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 DYRK1BQ9Y463 629 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 CLDN16Q9Y5I7 305 aa12.98□□□□□ -0.33
SMARCA4-206ENST00000538456 CLDN4O14493 209 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 AQP7O14520 342 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 WDR1O75083 606 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 SERPINA6P08185 405 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 GABRB3P28472 473 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 CXCR5P32302 372 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 DNASE1L1P49184 302 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 HK2P52789 917 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 HSD17B7P56937 341 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 CCZ1BP86790 482 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 CCZ1P86791 482 aaPredicted RBP12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 LTBQ06643 244 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 PDAP1Q13442 181 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 WLSQ5T9L3 541 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 TTC27Q6P3X3 843 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 HSDL2Q6YN16 418 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 RTL4Q6ZR62 310 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 THOC6Q86W42 341 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 C2CD4AQ8NCU7 369 aaPredicted RBP12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 MCUQ8NE86 351 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 CCT6BQ92526 530 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 SMR3AQ99954 134 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 PELI2Q9HAT8 420 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 IL1RL2Q9HB29 575 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 DMRT3Q9NQL9 472 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 SLC17A6Q9P2U8 582 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 EDARQ9UNE0 448 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 CLCA3PQ9Y6N3 262 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 FBN3Q75N90 2809 aa12.97□□□□□ -0.33
SMARCA4-206ENST00000538456 A0A1B0GVC2 190 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 A6NNC1 897 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 ERI3O43414 337 aaKnown RBP12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 CCL3P10147 92 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 FOSL1P15407 271 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 ENDOUP21128 410 aaKnown RBP12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 CNR1P21554 472 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 HNRNPH1P31943 449 aaKnown RBP12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 MAGEA3P43357 314 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 RAB38P57729 211 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 STXBP1P61764 594 aaKnown RBP12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 CRYMQ14894 314 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 ELAVL1Q15717 326 aaKnown RBP12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 NXPE4Q6UWF7 544 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 ZNF321PQ8N8H1 164 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 GPATCH11Q8N954 259 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 WFDC11Q8NEX6 87 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 GAL3ST3Q96A11 431 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 SARAFQ96BY9 339 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 SIGLEC10Q96LC7 697 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 CSF3RQ99062 836 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 OR8D2Q9GZM6 311 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 SEMA4BQ9NPR2 832 aaPredicted RBP12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 HOMER3Q9NSC5 361 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 SACM1LQ9NTJ5 587 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 TUBA8Q9NY65 449 aaPredicted RBP12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 SPRR3Q9UBC9 169 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 IKZF3Q9UKT9 509 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 SLC22A14Q9Y267 594 aa12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 MRPS33Q9Y291 106 aaKnown RBP12.96□□□□□ -0.33
SMARCA4-206ENST00000538456 FREM3P0C091 2139 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 B3GALT2O43825 422 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 SUSD5O60279 629 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 ZNF354AO60765 605 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 P04436 131 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 BMP5P22003 454 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms