RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 LRRC72A6NJI9 287 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 H3BSA7 217 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 M0QX08 132 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 RFXAPO00287 272 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 ETFAP13804 333 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 ANXA8P13928 327 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 SOAT1P35610 550 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 CDH15P55291 814 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 PCBP4P57723 403 aaKnown RBP12.93□□□□□ -0.34
SMG6-203ENST00000536871 NUP107P57740 925 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 ISL1P61371 349 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 EEF1A2Q05639 463 aaKnown RBP12.93□□□□□ -0.34
SMG6-203ENST00000536871 NFATC4Q14934 902 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 ZIC1Q15915 447 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 SLC5A12Q1EHB4 618 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 MPEG1Q2M385 716 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 ADPRMQ3LIE5 342 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 SAXO2Q658L1 398 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 REEP3Q6NUK4 255 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 FAHD1Q6P587 224 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 ADCK2Q7Z695 626 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 VTCN1Q7Z7D3 282 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 TMEM179BQ7Z7N9 219 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 TSPYL5Q86VY4 417 aaPredicted RBP12.93□□□□□ -0.34
SMG6-203ENST00000536871 C2orf73Q8N5S3 287 aaPredicted RBP12.93□□□□□ -0.34
SMG6-203ENST00000536871 ZFPM2Q8WW38 1151 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 CIDECQ96AQ7 238 aaPredicted RBP12.93□□□□□ -0.34
SMG6-203ENST00000536871 MOAP1Q96BY2 351 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 PDXPQ96GD0 296 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 WDR92Q96MX6 357 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 ADNPQ9H2P0 1102 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 CCNB1IP1Q9NPC3 277 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 GPATCH2Q9NW75 528 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 PDP1Q9P0J1 537 aaPredicted RBP12.93□□□□□ -0.34
SMG6-203ENST00000536871 TPRKBQ9Y3C4 175 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 PCDHGA8Q9Y5G5 932 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 SNX5Q9Y5X3 404 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 U3KQV3 271 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 PDE4DIPQ5VU43 2346 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 A0A1B0GTW7 788 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 LRIT2A6NDA9 550 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 C5orf58C9J3I9 102 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 hCG_2039718K7EN88 272 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 PRICKLE3O43900 615 aaPredicted RBP12.93□□□□□ -0.34
SMG6-203ENST00000536871 ADAM23O75077 832 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 TRMUO75648 421 aaKnown RBP12.93□□□□□ -0.34
SMG6-203ENST00000536871 TBX6O95947 436 aaPredicted RBP12.93□□□□□ -0.34
SMG6-203ENST00000536871 FUCA1P04066 466 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 NUDT7P0C024 238 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 EFNA1P20827 205 aaPredicted RBP12.93□□□□□ -0.34
SMG6-203ENST00000536871 SSR2P43308 183 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 PCBP3P57721 371 aaKnown RBP12.93□□□□□ -0.34
SMG6-203ENST00000536871 KCNC4Q03721 635 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 GNA13Q14344 377 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 SLC9A5Q14940 896 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 CLCA4Q14CN2 919 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 RNF130Q86XS8 419 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 ATG16L2Q8NAA4 619 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 CHDHQ8NE62 594 aaPredicted RBP12.93□□□□□ -0.34
SMG6-203ENST00000536871 SPPL2AQ8TCT8 520 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 CREB3L4Q8TEY5 395 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 KCNC2Q96PR1 638 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 GDF15Q99988 308 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 POLR1BQ9H9Y6 1135 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 CXorf21Q9HAI6 301 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 KRT84Q9NSB2 600 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 SCN3BQ9NY72 215 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 FAM32AQ9Y421 112 aaKnown RBP12.93□□□□□ -0.34
SMG6-203ENST00000536871 PCM1Q15154 2024 aa12.93□□□□□ -0.34
SMG6-203ENST00000536871 DOCK8Q8NF50 2099 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 CROCCQ5TZA2 2017 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 A0A0A6YYD5 115 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 ARRDC5A6NEK1 342 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 PRR23AA6NEV1 266 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 EGFP01133 1207 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 HNRNPA2B1P22626 353 aaKnown RBP12.92□□□□□ -0.34
SMG6-203ENST00000536871 CD97P48960 835 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 STXBP1P61764 594 aaKnown RBP12.92□□□□□ -0.34
SMG6-203ENST00000536871 CYP4F2P78329 520 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 IQCCQ4KMZ1 466 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 KIAA1614Q5VZ46 1190 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 DUS1LQ6P1R4 473 aaKnown RBP12.92□□□□□ -0.34
SMG6-203ENST00000536871 TMEM64Q6YI46 380 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 FAM92BQ6ZTR7 304 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 KCTD8Q6ZWB6 473 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 CROCCP3Q8IVE0 287 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 OR2L3Q8NG85 312 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 KLK6Q92876 244 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 ERLEC1Q96DZ1 483 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 MPP4Q96JB8 637 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 PSD2Q9BQI7 771 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 ROGDIQ9GZN7 287 aa12.92□□□□□ -0.34
SMG6-203ENST00000536871 SOX17Q9H6I2 414 aaPredicted RBP12.92□□□□□ -0.34
SMG6-203ENST00000536871 ANTXRLA6NF34 631 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 DCKP27707 260 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 PSMB5P28074 263 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 NTSP30990 170 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 AKT2P31751 481 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 PXNP49023 591 aaPredicted RBP12.91□□□□□ -0.34
SMG6-203ENST00000536871 DAPP51397 102 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms