RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	ATP8B4	Q8TF62	1192 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	DNASE2B	Q8WZ79	361 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	SLCO4A1	Q96BD0	722 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	LURAP1	Q96LR2	239 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	ERGIC2	Q96RQ1	377 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	SYT15	Q9BQS2	421 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	KRT23	Q9C075	422 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	C1orf21	Q9H246	121 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	ZNF696	Q9H7X3	374 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	FGF22	Q9HCT0	170 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	COPS7A	Q9UBW8	275 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	TRIM10	Q9UDY6	481 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	SMCHD1	A6NHR9	2005 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	ATP6AP2	A0A1C7CYW4	349 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	PRR23A	A6NEV1	266 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	LMO7DN	F2Z398	122 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	EEF2K	O00418	725 aa	Known RBP	4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	P2RX6	O15547	441 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	TPBGL	P0DKB5	382 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	CYP3A5	P20815	502 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	GPR183	P32249	361 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	OR1D2	P34982	312 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	BACE1	P56817	501 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	EVC	P57679	992 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	HERV-K104	P63124	156 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	TRADD	Q15628	312 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	ZFP69	Q49AA0	526 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	TAF1B	Q53T94	588 aa	Predicted RBP	4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	TOR1AIP1	Q5JTV8	583 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	PLPP4	Q5VZY2	271 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	WDR88	Q6ZMY6	472 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	HDDC3	Q8N4P3	179 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	OR2T6	Q8NHC8	308 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	GLYATL1	Q969I3	302 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	NSMCE2	Q96MF7	247 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	DUX3	Q96PT4	197 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	SSX3	Q99909	188 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	AGPAT1	Q99943	283 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	FUNDC2	Q9BWH2	189 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	DPEP3	Q9H4B8	488 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	MTHFD2L	Q9H903	347 aa	Predicted RBP	4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	B3GAT2	Q9NPZ5	323 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	SCRT2	Q9NQ03	307 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	DDX28	Q9NUL7	540 aa	Known RBP	4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	ACOXL	Q9NUZ1	547 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	MED17	Q9NVC6	651 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	NLGN3	Q9NZ94	848 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	NINJ2	Q9NZG7	142 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	CACNG5	Q9UF02	275 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	FAM153A	Q9UHL3	310 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	BAIAP2L1	Q9UHR4	511 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	MRTO4	Q9UKD2	239 aa	Known RBP	4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	CCPG1	Q9ULG6	757 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	ZHX2	Q9Y6X8	837 aa		4.65	□□□□□ -1.67
PRKDC-208	ENST00000536710	CFAP73	A6NFT4	308 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	SERINC4	A6NH21	518 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	PRPSAP2	O60256	369 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	MT-ATP6	P00846	226 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	IGLV1-44	P01699	117 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	ETS1	P14921	441 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	PRKACG	P22612	351 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	TMEM187	Q14656	261 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	BSPRY	Q5W0U4	402 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	OR6B2	Q6IFH4	312 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	DLEU7	Q6UYE1	221 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710		Q6ZRP5	223 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	TAF8	Q7Z7C8	310 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	CATSPERD	Q86XM0	798 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	ANKRD20A12P	Q8NF67	263 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	OR9Q2	Q8NGE9	314 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	OR5M9	Q8NGP3	310 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	OR4L1	Q8NH43	312 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	ZNF519	Q8TB69	540 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	FAM111A	Q96PZ2	611 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	USP28	Q96RU2	1077 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	S1PR3	Q99500	378 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	LITAF	Q99732	161 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	NUSAP1	Q9BXS6	441 aa	Known RBP	4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	TRPV6	Q9H1D0	765 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	KCNK13	Q9HB14	408 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	SPAST	Q9UBP0	616 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	KLK11	Q9UBX7	282 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	KCNN3	Q9UGI6	736 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	NARF	Q9UHQ1	456 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	GAB2	Q9UQC2	676 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	NUDC	Q9Y266	331 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	KIAA1217	Q5T5P2	1943 aa		4.64	□□□□□ -1.67
PRKDC-208	ENST00000536710	IQCM	A0A1B0GVH7	501 aa		4.63	□□□□□ -1.67
PRKDC-208	ENST00000536710	ANHX	E9PGG2	379 aa		4.63	□□□□□ -1.67
PRKDC-208	ENST00000536710	GRID2	O43424	1007 aa		4.63	□□□□□ -1.67
PRKDC-208	ENST00000536710	B3GALNT1	O75752	331 aa		4.63	□□□□□ -1.67
PRKDC-208	ENST00000536710	CFC1B	P0CG36	223 aa		4.63	□□□□□ -1.67
PRKDC-208	ENST00000536710	CFC1	P0CG37	223 aa		4.63	□□□□□ -1.67
PRKDC-208	ENST00000536710	ZNF26	P17031	533 aa	Predicted RBP	4.63	□□□□□ -1.67
PRKDC-208	ENST00000536710	HOXB6	P17509	224 aa	Known RBP	4.63	□□□□□ -1.67
PRKDC-208	ENST00000536710	IL10	P22301	178 aa		4.63	□□□□□ -1.67
PRKDC-208	ENST00000536710	GPX3	P22352	226 aa		4.63	□□□□□ -1.67
PRKDC-208	ENST00000536710	RABIF	P47224	123 aa		4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms