RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 FRG1Q14331 258 aaKnown RBP5.07□□□□□ -1.6
CLIP1-207ENST00000536634 ZNF699Q32M78 642 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 CDONQ4KMG0 1287 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 MPPE1Q53F39 396 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 ALFQ53S48 1182 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 RILPL1Q5EBL4 403 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 SPOPLQ6IQ16 392 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 RFWD3Q6PCD5 774 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 CRYBG2Q8N1P7 616 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 ARL14Q8N4G2 192 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 ACVR1CQ8NER5 493 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 OR14L1PQ8NHC6 308 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 WDR36Q8NI36 951 aaKnown RBP5.07□□□□□ -1.6
CLIP1-207ENST00000536634 KLK6Q92876 244 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 SYAP1Q96A49 352 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-207ENST00000536634 INTS12Q96CB8 462 aaKnown RBP5.07□□□□□ -1.6
CLIP1-207ENST00000536634 PRICKLE1Q96MT3 831 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-207ENST00000536634 PCGF1Q9BSM1 259 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 NLGN3Q9NZ94 848 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 CLIC5Q9NZA1 410 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 MDFICQ9P1T7 246 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 STOML2Q9UJZ1 356 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 OR2W1Q9Y3N9 320 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 VPS13CQ709C8 3753 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 TRPM6Q9BX84 2022 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 NAV3Q8IVL0 2385 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 EIF3CLB5ME19 914 aaKnown RBP5.06□□□□□ -1.6
CLIP1-207ENST00000536634 SCAMP1O15126 338 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 CLIC2O15247 247 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 MAGEC1O60732 1142 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 TBL1XO60907 577 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 IL1BP01584 269 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 ALPPL2P10696 532 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 SFTPCP11686 197 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 ZNF182P17025 639 aaPredicted RBP5.06□□□□□ -1.6
CLIP1-207ENST00000536634 GJB2P29033 226 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 DEKP35659 375 aaKnown RBP5.06□□□□□ -1.6
CLIP1-207ENST00000536634 LONP1P36776 959 aaKnown RBP5.06□□□□□ -1.6
CLIP1-207ENST00000536634 F2RL1P55085 397 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 TAS2R38P59533 333 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 ISL1P61371 349 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 RPL7AP62424 266 aaKnown RBP5.06□□□□□ -1.6
CLIP1-207ENST00000536634 PDE1BQ01064 536 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 CNTN1Q12860 1018 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 ALCAMQ13740 583 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 RBBP5Q15291 538 aaKnown RBP5.06□□□□□ -1.6
CLIP1-207ENST00000536634 TSTQ16762 297 aaKnown RBP5.06□□□□□ -1.6
CLIP1-207ENST00000536634 SYT16Q17RD7 645 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 FAM133BQ5BKY9 247 aaKnown RBP5.06□□□□□ -1.6
CLIP1-207ENST00000536634 FRG2Q64ET8 278 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 GCNT7Q6ZNI0 430 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 RSRC2Q7L4I2 434 aaKnown RBP5.06□□□□□ -1.6
CLIP1-207ENST00000536634 PRPF39Q86UA1 669 aaKnown RBP5.06□□□□□ -1.6
CLIP1-207ENST00000536634 TRIM69Q86WT6 500 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 NRROSQ86YC3 692 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.06□□□□□ -1.6
CLIP1-207ENST00000536634 RNF113BQ8IZP6 322 aaKnown RBP5.06□□□□□ -1.6
CLIP1-207ENST00000536634 LMNTD1Q8N9Z9 388 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 PCYOX1LQ8NBM8 494 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 TMA16Q96EY4 203 aaKnown RBP5.06□□□□□ -1.6
CLIP1-207ENST00000536634 RRNAD1Q96FB5 475 aaKnown RBP5.06□□□□□ -1.6
CLIP1-207ENST00000536634 CALN1Q9BXU9 219 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 AGPAT3Q9NRZ7 376 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 CNOT8Q9UFF9 292 aaKnown RBP5.06□□□□□ -1.6
CLIP1-207ENST00000536634 ERVW-1Q9UQF0 538 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 TMEM98Q9Y2Y6 226 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 ADAM18Q9Y3Q7 739 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 ESPL1Q14674 2120 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 SPG11Q96JI7 2443 aa5.06□□□□□ -1.6
CLIP1-207ENST00000536634 ITIH6Q6UXX5 1313 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 PCNX1Q96RV3 2341 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 EDDM13A0A1B0GTR0 161 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 ASPDHA6ND91 283 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 LILRA5A6NI73 299 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 LRRIQ3A6PVS8 624 aaPredicted RBP5.05□□□□□ -1.6
CLIP1-207ENST00000536634 PRAMEF26H0Y7S4 382 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 C16orf97H3BN30 126 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 RNF103O00237 685 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 NTN3O00634 580 aaPredicted RBP5.05□□□□□ -1.6
CLIP1-207ENST00000536634 SLC31A1O15431 190 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 CREB3O43889 395 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 CRYAAP02489 173 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 LIPCP11150 499 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 ITIH1P19827 911 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 UGT1A5P35504 534 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 USP8P40818 1118 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 ETV5P41161 510 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 UQCRFS1P47985 274 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 CCR9P51686 369 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 ST8SIA6P61647 398 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 YWHAGP61981 247 aaKnown RBP eCLIP5.05□□□□□ -1.6
CLIP1-207ENST00000536634 RPS24P62847 133 aaKnown RBP5.05□□□□□ -1.6
CLIP1-207ENST00000536634 FOXM1Q08050 763 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 INCA1Q0VD86 236 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 FZD2Q14332 565 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 ELAVL3Q14576 367 aaKnown RBP5.05□□□□□ -1.6
CLIP1-207ENST00000536634 TBCEQ15813 527 aaPredicted RBP5.05□□□□□ -1.6
CLIP1-207ENST00000536634 DEFB133Q30KQ1 61 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 RAB41Q5JT25 222 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 TPRG1LQ5T0D9 272 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms