RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 MPP2Q14168 576 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 NR6A1Q15406 480 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 CCDC153Q494R4 210 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 UNC50Q53HI1 259 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 ZNF678Q5SXM1 525 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 TMEM205Q6UW68 189 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 NDUFAF7Q7L592 441 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 UBE3DQ7Z6J8 389 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 PARP9Q8IXQ6 854 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 CA13Q8N1Q1 262 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 RBMXL3Q8N7X1 1067 aaKnown RBP16.91■□□□□ 0.3
CCDC61-201ENST00000536603 SRFBP1Q8NEF9 429 aaKnown RBP16.91■□□□□ 0.3
CCDC61-201ENST00000536603 OR4F6Q8NGB9 312 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 TRPC4APQ8TEL6 797 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 MTFMTQ96DP5 389 aaKnown RBP16.91■□□□□ 0.3
CCDC61-201ENST00000536603 QRFPRQ96P65 431 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 TMEM237Q96Q45 408 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 COPS7BQ9H9Q2 264 aaPredicted RBP16.91■□□□□ 0.3
CCDC61-201ENST00000536603 ZNF160Q9HCG1 818 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 PRDM7Q9NQW5 492 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 TSC22D4Q9Y3Q8 395 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 NBPF19A0A087WUL8 3843 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 SCN2AQ99250 2005 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 NSG1A0A0A6YYJ2 146 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 A0A1B0GTL3 188 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 GOLGA6L10A6NI86 522 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 MAGEB17A8MXT2 336 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 FAM227AF5H4B4 570 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 G3V2L1 256 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 PSMD12O00232 456 aaPredicted RBP16.9■□□□□ 0.3
CCDC61-201ENST00000536603 RTCAO00442 366 aaKnown RBP16.9■□□□□ 0.3
CCDC61-201ENST00000536603 PCDH17O14917 1159 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 B3GALT2O43825 422 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 TYROBPO43914 113 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 PLIN3O60664 434 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 OTCP00480 354 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 HPP00738 406 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 PROCP04070 461 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 CYC1P08574 325 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 MYL2P10916 166 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 COX6A1P12074 109 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 JAK1P23458 1154 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 ITGA3P26006 1051 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 CERS1P27544 350 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 MTTPP55157 894 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 RPS13P62277 151 aaKnown RBP16.9■□□□□ 0.3
CCDC61-201ENST00000536603 PHEXP78562 749 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 RHAGQ02094 409 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 CLCQ05315 142 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 ELOAQ14241 798 aaKnown RBP16.9■□□□□ 0.3
CCDC61-201ENST00000536603 TMEM35AQ53FP2 167 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 DEPDC1Q5TB30 811 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 KHDRBS2Q5VWX1 349 aaKnown RBP16.9■□□□□ 0.3
CCDC61-201ENST00000536603 LANCL3Q6ZV70 420 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 PLPP5Q8NEB5 264 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 WDR20Q8TBZ3 569 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 C19orf60Q96EN9 201 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 ATP6V1G3Q96LB4 118 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 KCNC2Q96PR1 638 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 SERINC2Q96SA4 455 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 TBCDQ9BTW9 1192 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 NPLQ9BXD5 320 aaPredicted RBP16.9■□□□□ 0.3
CCDC61-201ENST00000536603 DMRT3Q9NQL9 472 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 MKS1Q9NXB0 559 aa16.9■□□□□ 0.3
CCDC61-201ENST00000536603 LOC102723996A0A087X1L8 192 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 IGHV1-45A0A0A0MS14 117 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 IGHV3-20A0A0C4DH32 117 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 H3BQF6 201 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 PTX3P26022 381 aaPredicted RBP16.89■□□□□ 0.29
CCDC61-201ENST00000536603 SOX8P57073 446 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 BTG2P78543 158 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 ABRAXAS2Q15018 415 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 NSDHLQ15738 373 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 AP5B1Q2VPB7 878 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 TTC19Q6DKK2 380 aaPredicted RBP16.89■□□□□ 0.29
CCDC61-201ENST00000536603 ZYG11AQ6WRX3 759 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 CISD2Q8N5K1 135 aaKnown RBP16.89■□□□□ 0.29
CCDC61-201ENST00000536603 CCDC63Q8NA47 563 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 TSLPQ969D9 159 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 L3HYPDHQ96EM0 354 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 APOPT1Q96IL0 206 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 C5orf34Q96MH7 638 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 PTCHD1Q96NR3 888 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 SMC6Q96SB8 1091 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 ROGDIQ9GZN7 287 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 ZNF700Q9H0M5 742 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 SENP1Q9P0U3 644 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 SLC17A7Q9P2U7 560 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 C19orf25Q9UFG5 118 aaPredicted RBP16.89■□□□□ 0.29
CCDC61-201ENST00000536603 ERRFI1Q9UJM3 462 aaPredicted RBP16.89■□□□□ 0.29
CCDC61-201ENST00000536603 ACTL7BQ9Y614 415 aa16.89■□□□□ 0.29
CCDC61-201ENST00000536603 NUP210LQ5VU65 1888 aa16.88■□□□□ 0.29
CCDC61-201ENST00000536603 A0A1W2PQ72 361 aa16.88■□□□□ 0.29
CCDC61-201ENST00000536603 PRMT3O60678 531 aa16.88■□□□□ 0.29
CCDC61-201ENST00000536603 ATP5A1P25705 553 aaKnown RBP16.88■□□□□ 0.29
CCDC61-201ENST00000536603 DCTP40126 519 aa16.88■□□□□ 0.29
CCDC61-201ENST00000536603 RAP1GDS1P52306 607 aa16.88■□□□□ 0.29
CCDC61-201ENST00000536603 RAB38P57729 211 aa16.88■□□□□ 0.29
CCDC61-201ENST00000536603 Q0VFX4 171 aa16.88■□□□□ 0.29
CCDC61-201ENST00000536603 MYBPC3Q14896 1274 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms