RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 MAGED4Q96JG8 741 aa17.56■□□□□ 0.4
NDUFS3-213ENST00000534716 KCNC2Q96PR1 638 aa17.56■□□□□ 0.4
NDUFS3-213ENST00000534716 ATOH8Q96SQ7 321 aa17.56■□□□□ 0.4
NDUFS3-213ENST00000534716 ROGDIQ9GZN7 287 aa17.56■□□□□ 0.4
NDUFS3-213ENST00000534716 NMRAL1Q9HBL8 299 aa17.56■□□□□ 0.4
NDUFS3-213ENST00000534716 LYRM4Q9HD34 91 aa17.56■□□□□ 0.4
NDUFS3-213ENST00000534716 ADAP2Q9NPF8 381 aa17.56■□□□□ 0.4
NDUFS3-213ENST00000534716 NUDT4Q9NZJ9 180 aa17.56■□□□□ 0.4
NDUFS3-213ENST00000534716 KCMF1Q9P0J7 381 aa17.56■□□□□ 0.4
NDUFS3-213ENST00000534716 ZNF223Q9UK11 482 aaPredicted RBP17.56■□□□□ 0.4
NDUFS3-213ENST00000534716 TEP1Q99973 2627 aaKnown RBP17.56■□□□□ 0.4
NDUFS3-213ENST00000534716 DIDO1Q9BTC0 2240 aaKnown RBP17.56■□□□□ 0.4
NDUFS3-213ENST00000534716 ABCA12Q86UK0 2595 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 APCP25054 2843 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 CREBBPQ92793 2442 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 TRBV11-1A0A0K0K1C0 115 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 NPIPA5E9PKD4 350 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 FAM155BO75949 473 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 S100BP04271 92 aaPredicted RBP17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 ZNF24P17028 368 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 SERPINB1P30740 379 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 IRF8Q02556 426 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 DLG1Q12959 904 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 SLC13A2Q13183 592 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 CHIT1Q13231 466 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 ELAVL1Q15717 326 aaKnown RBP17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 TMEM35AQ53FP2 167 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 RNFT1Q5M7Z0 435 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 XKRXQ6PP77 449 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 UBE3DQ7Z6J8 389 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 LAS2Q8IYD9 372 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 GHDCQ8N2G8 530 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 TMEM132CQ8N3T6 1108 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 CPSF7Q8N684 471 aaKnown RBP17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 PPM1NQ8N819 430 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 FAM47BQ8NA70 645 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 FBF1Q8TES7 1133 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 NCLNQ969V3 563 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 MARVELD3Q96A59 401 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 F2RL3Q96RI0 385 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 TBCDQ9BTW9 1192 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 ALG9Q9H6U8 611 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 PNO1Q9NRX1 252 aaKnown RBP17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 VTI1BQ9UEU0 232 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 TINAGQ9UJW2 476 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 NPIPA1Q9UND3 350 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 KLF13Q9Y2Y9 288 aaPredicted RBP17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 ASB1Q9Y576 335 aa17.55■□□□□ 0.4
NDUFS3-213ENST00000534716 CCNT2O60583 730 aaKnown RBP17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 KERAO60938 352 aa17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 ZFAND5O76080 213 aa17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 SCELO95171 688 aa17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 LTA4HP09960 611 aaKnown RBP17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 CERS1P27544 350 aa17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 PPP2R1BP30154 601 aa17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 ADORA2A-AS1P86434 159 aa17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 TRADDQ15628 312 aa17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 ZNF630Q2M218 657 aaPredicted RBP17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 RAPH1Q70E73 1250 aa17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 CMC1Q7Z7K0 106 aa17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 TBC1D1Q86TI0 1168 aaPredicted RBP17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 GPALPP1Q8IXQ4 340 aa17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 C7orf57Q8NEG2 295 aa17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 ZNF473Q8WTR7 871 aaKnown RBP17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 CSF3RQ99062 836 aa17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 CCDC77Q9BR77 488 aa17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 MS4A8Q9BY19 250 aa17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 TSPAN10Q9H1Z9 355 aaPredicted RBP17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 COPS7BQ9H9Q2 264 aaPredicted RBP17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 CHST11Q9NPF2 352 aa17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 YARS2Q9Y2Z4 477 aaKnown RBP17.54■□□□□ 0.4
NDUFS3-213ENST00000534716 TMEM200CA6NKL6 621 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 KLRC4-KLRK1H3BQV0 150 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 K7EPI3 171 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 ITGA10O75578 1167 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 SYT10Q6XYQ8 523 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 ZNF793Q6ZN11 406 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 CCDC25Q86WR0 208 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 SULF2Q8IWU5 870 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 CYP4Z2PQ8N1L4 340 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 ZFP62Q8NB50 900 aaPredicted RBP17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 MORN4Q8NDC4 146 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 C16orf52Q8NHV5 167 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 RHEBL1Q8TAI7 183 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 PTPMT1Q8WUK0 201 aaPredicted RBP17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 DAZLQ92904 295 aaKnown RBP17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 SH3BGRL2Q9UJC5 107 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 FBXW2Q9UKT8 454 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 MEMO1Q9Y316 297 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 TSC22D4Q9Y3Q8 395 aa17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.53■□□□□ 0.4
NDUFS3-213ENST00000534716 ARHGAP10A1A4S6 786 aa17.52■□□□□ 0.4
NDUFS3-213ENST00000534716 PRKNO60260 465 aaPredicted RBP17.52■□□□□ 0.4
NDUFS3-213ENST00000534716 ESRRAP11474 423 aaPredicted RBP17.52■□□□□ 0.4
NDUFS3-213ENST00000534716 MTHFD2P13995 350 aa17.52■□□□□ 0.4
NDUFS3-213ENST00000534716 PRF1P14222 555 aa17.52■□□□□ 0.4
NDUFS3-213ENST00000534716 ATP5A1P25705 553 aaKnown RBP17.52■□□□□ 0.4
NDUFS3-213ENST00000534716 GRNP28799 593 aaKnown RBP17.52■□□□□ 0.4
NDUFS3-213ENST00000534716 GMPRP36959 345 aa17.52■□□□□ 0.4
NDUFS3-213ENST00000534716 MSH2P43246 934 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms