RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TMEM169Q96HH4 297 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 EHD3Q9NZN3 535 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 CFAP20Q9Y6A4 193 aaKnown RBP18.51■□□□□ 0.55
CAPN1-226ENST00000533820 C12orf71A8MTZ7 269 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 FADS2P1A8MWK0 482 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 B8ZZF3 427 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 NEDD8-MDP1E9PL57 170 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 C2orf80Q0P641 193 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 MICAQ29983 383 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 SPANXN2Q5MJ10 180 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 PLEKHS1Q5SXH7 462 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 TMEM25Q86YD3 366 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 TAGAPQ8N103 731 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 CCDC120Q96HB5 630 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 CEP19Q96LK0 163 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 COL21A1Q96P44 957 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 LYSMD1Q96S90 227 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 CNPPD1Q9BV87 410 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 OR2B2Q9GZK3 357 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 CCL26Q9Y258 94 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 PCDHGB6Q9Y5F9 930 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 PRMT3O60678 531 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 KCNJ13O60928 360 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 AOC2O75106 756 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 MED26O95402 600 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 MPPE1Q53F39 396 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 GCNT6Q5T4J0 391 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 PTCHD4Q6ZW05 846 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 ZNF740Q8NDX6 193 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 KBTBD8Q8NFY9 601 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 TRMT2BQ96GJ1 504 aaKnown RBP18.5■□□□□ 0.55
CAPN1-226ENST00000533820 MGLLQ99685 303 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 ACAT2Q9BWD1 397 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 CPNE5Q9HCH3 593 aa18.5■□□□□ 0.55
CAPN1-226ENST00000533820 SCN5AQ14524 2016 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 URODP06132 367 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 MPC1LP0DKB6 136 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 IFI30P13284 250 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 ZNF8P17098 575 aaPredicted RBP18.49■□□□□ 0.55
CAPN1-226ENST00000533820 ATF4P18848 351 aaPredicted RBP18.49■□□□□ 0.55
CAPN1-226ENST00000533820 IMPA1P29218 277 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 CNR2P34972 360 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 SOX3P41225 446 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 PIK3CBP42338 1070 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 MVDP53602 400 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 RPS26P11Q5JNZ5 115 aaPredicted RBP18.49■□□□□ 0.55
CAPN1-226ENST00000533820 FIBINQ8TAL6 211 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 CYB5D2Q8WUJ1 264 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 MRPS31Q92665 395 aaKnown RBP18.49■□□□□ 0.55
CAPN1-226ENST00000533820 DACT3Q96B18 629 aaPredicted RBP18.49■□□□□ 0.55
CAPN1-226ENST00000533820 SP140LQ9H930 580 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 MAT2BQ9NZL9 334 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 CKAP5Q14008 2032 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 PLXNB3Q9ULL4 1909 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 PNMA8CA0A1B0GUJ8 204 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 SMIM30A4D0T7 59 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 TIA1P31483 386 aaKnown RBP eCLIP18.49■□□□□ 0.551e-10■□□□□ 11.1
CAPN1-226ENST00000533820 ZNF181Q2M3W8 571 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 ANGPTL6Q8NI99 470 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 C12orf10Q9HB07 376 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 POFUT2Q9Y2G5 429 aa18.49■□□□□ 0.55
CAPN1-226ENST00000533820 WWP2O00308 870 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 HOXA2O43364 376 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 GADD45GO95257 159 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 UGT2B15P54855 530 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 TAS2R50P59544 299 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 CDK6Q00534 326 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 ANXA8L1Q5VT79 327 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 COMMD6Q7Z4G1 85 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 HMGN2P46Q86SG4 172 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 RAET1EQ8TD07 263 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 ECHDC3Q96DC8 303 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 NRTNQ99748 197 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 AIFM2Q9BRQ8 373 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 DNAJC27Q9NZQ0 273 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 LOC110117498-PIK3R3F6TDL0 507 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 AP3D1O14617 1153 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 POLR1CO15160 346 aaPredicted RBP18.48■□□□□ 0.55
CAPN1-226ENST00000533820 GASTP01350 101 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 KLK1P06870 262 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 ANXA8P13928 327 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 MXD1Q05195 221 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 DUSP7Q16829 419 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 PRSS53Q2L4Q9 553 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 LSRQ86X29 649 aaPredicted RBP18.48■□□□□ 0.55
CAPN1-226ENST00000533820 RASGEF1AQ8N9B8 481 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 BTNL2Q9UIR0 455 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 SH3BP5O60239 455 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 POP4O95707 220 aaKnown RBP18.48■□□□□ 0.55
CAPN1-226ENST00000533820 UGT2B10P36537 528 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 ASMTP46597 345 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 CSNK2BP67870 215 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 DAB2P98082 770 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 SLBPQ14493 270 aaKnown RBP eCLIP18.48■□□□□ 0.55
CAPN1-226ENST00000533820 TEAD4Q15561 434 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 GRHL2Q6ISB3 625 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 PNCKQ6P2M8 343 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 TNFAIP8L2Q6P589 184 aaPredicted RBP18.48■□□□□ 0.55
CAPN1-226ENST00000533820 PPCDCQ96CD2 204 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 FCRL1Q96LA6 429 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms