RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 EXT2Q93063 718 aa17.72■□□□□ 0.43
SSH3-209ENST00000532600 MTBPQ96DY7 904 aa17.72■□□□□ 0.43
SSH3-209ENST00000532600 ATOH8Q96SQ7 321 aa17.72■□□□□ 0.43
SSH3-209ENST00000532600 PITHD1Q9GZP4 211 aaPredicted RBP17.72■□□□□ 0.43
SSH3-209ENST00000532600 CD274Q9NZQ7 290 aa17.72■□□□□ 0.43
SSH3-209ENST00000532600 ZNF223Q9UK11 482 aaPredicted RBP17.72■□□□□ 0.43
SSH3-209ENST00000532600 PCDHGB6Q9Y5F9 930 aa17.72■□□□□ 0.43
SSH3-209ENST00000532600 A0A1W2PPM1 405 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 ZG16O60844 167 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 TFEBP19484 476 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 TPP2P29144 1249 aaPredicted RBP17.71■□□□□ 0.43
SSH3-209ENST00000532600 DCTP40126 519 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 PLA2G16P53816 162 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 XKR6Q5GH73 641 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 ABHD17CQ6PCB6 329 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 GFRALQ6UXV0 394 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 TBC1D1Q86TI0 1168 aaPredicted RBP17.71■□□□□ 0.43
SSH3-209ENST00000532600 FJX1Q86VR8 437 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 RPS19BP1Q86WX3 136 aaKnown RBP17.71■□□□□ 0.43
SSH3-209ENST00000532600 LGI4Q8N135 537 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 KRT78Q8N1N4 520 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 SLC5A8Q8N695 610 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 APCDD1LQ8NCL9 501 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 TTLQ8NG68 377 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 OR2L5Q8NG80 312 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 SUN3Q8TAQ9 357 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 ZBTB9Q96C00 473 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 PTCD3Q96EY7 689 aaKnown RBP17.71■□□□□ 0.43
SSH3-209ENST00000532600 SEC16BQ96JE7 1060 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 CSF3RQ99062 836 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 UTP23Q9BRU9 249 aaKnown RBP17.71■□□□□ 0.43
SSH3-209ENST00000532600 NPLQ9BXD5 320 aaPredicted RBP17.71■□□□□ 0.43
SSH3-209ENST00000532600 CAPS2Q9BXY5 557 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 CD244Q9BZW8 370 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 CNOT10Q9H9A5 744 aaKnown RBP17.71■□□□□ 0.43
SSH3-209ENST00000532600 PRDM7Q9NQW5 492 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 KLHL1Q9NR64 748 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 RNF112Q9ULX5 631 aa17.71■□□□□ 0.43
SSH3-209ENST00000532600 IQANK1A0A1B0GTG1 560 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 ASPDHA6ND91 283 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 UBXN8O00124 270 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 PSMD12O00232 456 aaPredicted RBP17.7■□□□□ 0.42
SSH3-209ENST00000532600 CYR61O00622 381 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 CLGNO14967 610 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 CCNT2O60583 730 aaKnown RBP17.7■□□□□ 0.42
SSH3-209ENST00000532600 UNC5CO95185 931 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 KLHL2O95198 593 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 CRYABP02511 175 aaKnown RBP17.7■□□□□ 0.42
SSH3-209ENST00000532600 MTHFD2P13995 350 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 CERS1P27544 350 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 GSTM2P28161 218 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 CASP2P42575 452 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 GPR143P51810 404 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 RAB38P57729 211 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 MLF1P58340 268 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 ZNF844Q08AG5 666 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 ZRSR2Q15696 482 aaKnown RBP17.7■□□□□ 0.42
SSH3-209ENST00000532600 LGSNQ5TDP6 509 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 CCDC91Q7Z6B0 441 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 ARMC10Q8N2F6 343 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 UBTD2Q8WUN7 234 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 RELTQ969Z4 430 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 FAR2Q96K12 515 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 F2RL3Q96RI0 385 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 REXO4Q9GZR2 422 aaKnown RBP17.7■□□□□ 0.42
SSH3-209ENST00000532600 PPCSQ9HAB8 311 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 NUDT4Q9NZJ9 180 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 MMACHCQ9Y4U1 282 aa17.7■□□□□ 0.42
SSH3-209ENST00000532600 TLDC2A0PJX2 215 aa17.69■□□□□ 0.42
SSH3-209ENST00000532600 GOLGA8RI6L899 631 aa17.69■□□□□ 0.42
SSH3-209ENST00000532600 CDH16O75309 829 aa17.69■□□□□ 0.42
SSH3-209ENST00000532600 LIM2P55344 173 aa17.69■□□□□ 0.42
SSH3-209ENST00000532600 CHIT1Q13231 466 aa17.69■□□□□ 0.42
SSH3-209ENST00000532600 TBCCQ15814 346 aa17.69■□□□□ 0.42
SSH3-209ENST00000532600 ZNF793Q6ZN11 406 aa17.69■□□□□ 0.42
SSH3-209ENST00000532600 FAM47BQ8NA70 645 aa17.69■□□□□ 0.42
SSH3-209ENST00000532600 STAG3L4Q8TBR4 150 aa17.69■□□□□ 0.42
SSH3-209ENST00000532600 EFCAB11Q9BUY7 163 aa17.69■□□□□ 0.42
SSH3-209ENST00000532600 TMEM109Q9BVC6 243 aa17.69■□□□□ 0.42
SSH3-209ENST00000532600 TRIM45Q9H8W5 580 aaPredicted RBP17.69■□□□□ 0.42
SSH3-209ENST00000532600 NMRAL1Q9HBL8 299 aa17.69■□□□□ 0.42
SSH3-209ENST00000532600 KCMF1Q9P0J7 381 aa17.69■□□□□ 0.42
SSH3-209ENST00000532600 SEC14L3Q9UDX4 400 aa17.69■□□□□ 0.42
SSH3-209ENST00000532600 LGALS13Q9UHV8 139 aa17.69■□□□□ 0.42
SSH3-209ENST00000532600 PPIEQ9UNP9 301 aaKnown RBP17.69■□□□□ 0.42
SSH3-209ENST00000532600 ANKDD1BA6NHY2 528 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 PRKNO60260 465 aaPredicted RBP17.68■□□□□ 0.42
SSH3-209ENST00000532600 KERAO60938 352 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 MYO1DO94832 1006 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 SP1P08047 785 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 PYGBP11216 843 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 TAS2R50P59544 299 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 PCDH1Q08174 1060 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 IFFO1Q0D2I5 559 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 FAM83EQ2M2I3 478 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 TECRLQ5HYJ1 363 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 RNFT1Q5M7Z0 435 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 LRRC70Q7Z2Q7 622 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 GALNTL5Q7Z4T8 443 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 SIAH3Q8IW03 269 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms