RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 OSGIN2Q9Y236 505 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 GABRR3A8MPY1 467 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 MAN1A2O60476 641 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 CTNSO60931 367 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 MYO1DO94832 1006 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 CD46P15529 392 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 CNTFP26441 200 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 ECHS1P30084 290 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 ST13P50502 369 aaKnown RBP16.12■□□□□ 0.17
PHRF1-204ENST00000532550 CLCN2P51788 898 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 PCBP2Q15366 365 aaKnown RBP eCLIP16.12■□□□□ 0.17
PHRF1-204ENST00000532550 OR1C1Q15619 314 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 SPINK14Q6IE38 97 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 UBE3DQ7Z6J8 389 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 SCUBE1Q8IWY4 988 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 PLD6Q8N2A8 252 aaKnown RBP16.12■□□□□ 0.17
PHRF1-204ENST00000532550 ACOT4Q8N9L9 421 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 NFAM1Q8NET5 270 aaPredicted RBP16.12■□□□□ 0.17
PHRF1-204ENST00000532550 B3GNT7Q8NFL0 401 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 NR4A3Q92570 626 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 SCYL1Q96KG9 808 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 CENPKQ9BS16 269 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 IPPKQ9H8X2 491 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 LYRM4Q9HD34 91 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 NFU1Q9UMS0 254 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 PCDHGB6Q9Y5F9 930 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 SPACA6W5XKT8 324 aa16.12■□□□□ 0.17
PHRF1-204ENST00000532550 DIDO1Q9BTC0 2240 aaKnown RBP16.12■□□□□ 0.17
PHRF1-204ENST00000532550 SYNDIG1LA6NDD5 238 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 CYR61O00622 381 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 E2F3O00716 465 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 IFNA16P05015 189 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 COL6A2P12110 1019 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 ATP5A1P25705 553 aaKnown RBP16.11■□□□□ 0.17
PHRF1-204ENST00000532550 PIK3CGP48736 1102 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 HNRNPFP52597 415 aaKnown RBP16.11■□□□□ 0.17
PHRF1-204ENST00000532550 PHEXP78562 749 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 STX4Q12846 297 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 DDX39BQ13838 428 aaKnown RBP16.11■□□□□ 0.17
PHRF1-204ENST00000532550 GTF2H2Q13888 395 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 TERF2Q15554 542 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 DEPDC1Q5TB30 811 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 LGSNQ5TDP6 509 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 KHDRBS2Q5VWX1 349 aaKnown RBP16.11■□□□□ 0.17
PHRF1-204ENST00000532550 ZNF324BQ6AW86 544 aaPredicted RBP16.11■□□□□ 0.17
PHRF1-204ENST00000532550 GTF2H2CQ6P1K8 395 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 METTL2BQ6P1Q9 378 aaKnown RBP16.11■□□□□ 0.17
PHRF1-204ENST00000532550 CLNKQ7Z7G1 428 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 TMEM52Q8NDY8 209 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 HUS1BQ8NHY5 278 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 ATP6V1E2Q96A05 226 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 RGMAQ96B86 450 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 REPS1Q96D71 796 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 SIGLEC12Q96PQ1 595 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 OR51B5Q9H339 312 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 KLHL1Q9NR64 748 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 ZNF358Q9NW07 568 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 KCMF1Q9P0J7 381 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 LRFN1Q9P244 771 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 ZNF180Q9UJW8 692 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 TMCO1Q9UM00 188 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 PCDHGA11Q9Y5H2 935 aa16.11■□□□□ 0.17
PHRF1-204ENST00000532550 LRRC14BA6NHZ5 514 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 TRIM49D1C9J1S8 452 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 SAP18O00422 153 aaKnown RBP16.1■□□□□ 0.17
PHRF1-204ENST00000532550 RTCAO00442 366 aaKnown RBP16.1■□□□□ 0.17
PHRF1-204ENST00000532550 FCHO1O14526 889 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 UGDHO60701 494 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 HIST1H1TP22492 207 aaPredicted RBP16.1■□□□□ 0.17
PHRF1-204ENST00000532550 PTX3P26022 381 aaPredicted RBP16.1■□□□□ 0.17
PHRF1-204ENST00000532550 EEF1DP29692 281 aaKnown RBP16.1■□□□□ 0.17
PHRF1-204ENST00000532550 PIK3CBP42338 1070 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 SSR2P43308 183 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 MAGEA12P43365 314 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 CYB561P49447 251 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 RAP1GDS1P52306 607 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 MLF1P58340 268 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 TSNAXIP1Q2TAA8 658 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 TECRLQ5HYJ1 363 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 OR4C11Q6IEV9 310 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 GOLGA7Q7Z5G4 137 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 TMEM132CQ8N3T6 1108 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 TMEM178AQ8NBL3 297 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 MDS2Q8NDY4 140 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 DCAKDQ8WVC6 231 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 ISL2Q96A47 359 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 PHF21BQ96EK2 531 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 CSF3RQ99062 836 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 MAPKAP1Q9BPZ7 522 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 CCDC77Q9BR77 488 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 ALOXE3Q9BYJ1 711 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 ADAP2Q9NPF8 381 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 FBXW2Q9UKT8 454 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 CLCA3PQ9Y6N3 262 aa16.1■□□□□ 0.17
PHRF1-204ENST00000532550 TRBV11-1A0A0K0K1C0 115 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 EXOC1LA0A1B0GW35 172 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 WIPF3A6NGB9 483 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 H0YIV9 168 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 TGFBR3LH3BV60 316 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 LRRTM2O43300 516 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms