RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 FNDC3BQ53EP0 1204 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 KLHL26Q53HC5 615 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 CCNJQ5T5M9 372 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 STEAP4Q687X5 459 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 CDC73Q6P1J9 531 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 MSANTD2Q6P1R3 559 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF704Q6ZNC4 412 aaPredicted RBP6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 TMEM203Q969S6 136 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 LHX5Q9H2C1 402 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 NT5DC2Q9H857 520 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 RBM22Q9NW64 420 aaKnown RBP eCLIP6.54□□□□□ -1.363e-7■■■■■ 45.5
TGFBR3-209ENST00000532540 SLC23A1Q9UHI7 598 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 OSGIN1Q9UJX0 560 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 PKP3Q9Y446 797 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 FKBP7Q9Y680 259 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 NUMA1Q14980 2115 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 FXYD6-FXYD2A0A087WZ82 144 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 SMIM30A4D0T7 59 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 CARNS1A5YM72 827 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 TNFRSF11BO00300 401 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 SUV39H1O43463 412 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ALDH1A2O94788 518 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 PRKCGP05129 697 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF14P17017 642 aaPredicted RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ARFIP1P53367 373 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 POLR2GP62487 172 aaKnown RBP eCLIP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 DLX2Q07687 328 aaPredicted RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ABRQ12979 859 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 LCP2Q13094 533 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 GPR50Q13585 617 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 LY6G5CQ5SRR4 150 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 FAM171BQ6P995 826 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 KIAA1324Q6UXG2 1013 aaKnown RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 PAQR9Q6ZVX9 377 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 RD3Q7Z3Z2 195 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 B3GNT8Q7Z7M8 397 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 TP53INP2Q8IXH6 220 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 MARVELD3Q96A59 401 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 TMEM125Q96AQ2 219 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 TBL1YQ9BQ87 522 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 RTP3Q9BQQ7 232 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 WDR83Q9BRX9 315 aaKnown RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 FXYD6Q9H0Q3 95 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 RBFOX1Q9NWB1 397 aaKnown RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 C1orf109Q9NX04 203 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 CA14Q9ULX7 337 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 CCL26Q9Y258 94 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 CRYL1Q9Y2S2 319 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 POLR3HQ9Y535 204 aaPredicted RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ZFP37Q9Y6Q3 630 aaPredicted RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 GLYATL1P3A0A0U1RQE8 302 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 OR5K3A6NET4 321 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 EPOPA6NHQ4 379 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 RHPN2P1A8MT19 583 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF197O14709 1029 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 CREG1O75629 220 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 OAZ2O95190 189 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 F9P00740 461 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 CHMP24386 653 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ADRA1BP35368 520 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 MAGEA11P43364 429 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 PSMD8P48556 350 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 FNTBP49356 437 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 RGS6P49758 472 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 RHOAP61586 193 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 UFM1P61960 85 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 NKX3-2P78367 333 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 MC2RQ01718 297 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 TBCEQ15813 527 aaPredicted RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 CES4AQ5XG92 561 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 PKN3Q6P5Z2 889 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 BLOC1S3Q6QNY0 202 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 TEX261Q6UWH6 196 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 RPS27LQ71UM5 84 aaKnown RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 LURAP1LQ8IV03 231 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 OR4A15Q8NGL6 344 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF671Q8TAW3 534 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 SLC13A3Q8WWT9 602 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ELMOD3Q96FG2 381 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 CSPG4P5Q96PW8 444 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 TREX2Q9BQ50 279 aaPredicted RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ARL6Q9H0F7 186 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 NSUN3Q9H649 340 aaKnown RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 TDP1Q9NUW8 608 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ZIM2Q9NZV7 527 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 SPIN1Q9Y657 262 aaPredicted RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 U3KQ87 197 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 WDR87Q6ZQQ6 2873 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 B4DXG7 233 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 CCNB2O95067 398 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 PCDH8O95206 1070 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 GLP2RO95838 553 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 S100A8P05109 93 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 TCF3P15923 654 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 CEBPBP17676 345 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 NMBRP28336 390 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 GKP32189 559 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 CD79BP40259 229 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ALDH9A1P49189 494 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 PER3P56645 1201 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms