RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 RHOXF2BP0C7M4 288 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 NPPBP16860 134 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 WT1P19544 449 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 TCN2P20062 427 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 ATP5F1P24539 256 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 FPR2P25090 351 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 IMPA1P29218 277 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 ECHS1P30084 290 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 RORAP35398 523 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 DEKP35659 375 aaKnown RBP5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 AP1S2P56377 157 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 TBPL1P62380 186 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 RPS15P62841 145 aaKnown RBP5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 YBX1P67809 324 aaKnown RBP5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 MC1RQ01726 317 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 PRDX1Q06830 199 aaKnown RBP5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 EPS8Q12929 822 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 GPS2Q13227 327 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 DNASE1L3Q13609 305 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 MYBPC3Q14896 1274 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLMAPQ14BN4 828 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 EFTUD2Q15029 972 aaKnown RBP eCLIP5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 GPR68Q15743 365 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 PHKG1Q16816 387 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 ATG16L1Q676U5 607 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 CAPN13Q6MZZ7 669 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 FAM199XQ6PEV8 388 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 AGTRAPQ6RW13 159 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 MBOAT1Q6ZNC8 495 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 FRA10AC1Q70Z53 315 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 BTN2A1Q7KYR7 527 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 ADCK2Q7Z695 626 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 EPHX4Q8IUS5 362 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 CEP97Q8IW35 865 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLC44A2Q8IWA5 706 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 OR8H3Q8N146 312 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLC38A9Q8NBW4 561 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 PHOSPHO1Q8TCT1 267 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 CT55Q8WUE5 264 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 ANKRD49Q8WVL7 239 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 ATL1Q8WXF7 558 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 ASB15Q8WXK1 588 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 STARD8Q92502 1023 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 ANKRD7Q92527 254 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 MR1Q95460 341 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 RNF125Q96EQ8 232 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 MED8Q96G25 268 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLC45A3Q96JT2 553 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 PSMG3-AS1Q96PY0 264 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 CYTH2Q99418 400 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 GPR22Q99680 433 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 SELENOSQ9BQE4 189 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 RHOXF2Q9BQY4 288 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 DPH7Q9BTV6 452 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 NDC1Q9BTX1 674 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 GPR87Q9BY21 358 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 SPRTNQ9H040 489 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 PCBD2Q9H0N5 130 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 ATG10Q9H0Y0 220 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 CDC42EP4Q9H3Q1 356 aaKnown RBP5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 ACSS3Q9H6R3 686 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 EPS8L2Q9H6S3 715 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 L2HGDHQ9H9P8 463 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 TXLNGQ9NUQ3 528 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 AP5S1Q9NUS5 200 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 PCMTD2Q9NV79 361 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 NINJ2Q9NZG7 142 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 STOX2Q9P2F5 926 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 ANKMY1Q9P2S6 941 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 CTNNAL1Q9UBT7 734 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 IL17BQ9UHF5 180 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 KCND3Q9UK17 655 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 IKZF3Q9UKT9 509 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 TCFL5Q9UL49 500 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 NFU1Q9UMS0 254 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 SNX7Q9UNH6 387 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 KLK4Q9Y5K2 254 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 FREM2Q5SZK8 3169 aa5.51□□□□□ -1.53
HMGB1P42-201ENST00000532126 A0A087WUV0 522 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 A0A0J9YVX5 310 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 OR2A25A4D2G3 310 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 C9J4A7 227 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 H3BMH7 237 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 TERTO14746 1132 aaKnown RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 NKX2-8O15522 239 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 SRPX2O60687 465 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 TGDSO95455 350 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 GUCA1CO95843 209 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 EIF2S1P05198 315 aaKnown RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 ANXA5P08758 320 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 CCDC166P0CW27 439 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 PRKAR1AP10644 381 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 EZRP15311 586 aaKnown RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 F8A1P23610 371 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 HRH2P25021 359 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 PTPN4P29074 926 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 CRABP2P29373 138 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 EEF1DP29692 281 aaKnown RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 HNF4AP41235 474 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 ARSFP54793 590 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms