RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 DPH5Q9H2P9 285 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 FKBP14Q9NWM8 211 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 GDAP2Q9NXN4 497 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 SEC63Q9UGP8 760 aaKnown RBP3.15□□□□□ -1.91
PTPRK-220ENST00000531466 PSME2Q9UL46 239 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 PCDHGB4Q9UN71 923 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 EXOC7Q9UPT5 735 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 STK38LQ9Y2H1 464 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 GRIP1Q9Y3R0 1128 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 ROCK1Q13464 1354 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 LOC100509620A0A075B734 347 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.14□□□□□ -1.91
PTPRK-220ENST00000531466 GOLGA6L7A0A1B0GV03 622 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 SNURFLB1AK76 121 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 FPGTO14772 594 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 GJB3O75712 270 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 CRTAPO75718 401 aaPredicted RBP3.14□□□□□ -1.91
PTPRK-220ENST00000531466 ECDO95905 644 aaPredicted RBP3.14□□□□□ -1.91
PTPRK-220ENST00000531466 CHRNA1P02708 482 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 ASGR1P07306 291 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 IFNAR1P17181 557 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 SAT1P21673 171 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 PRKACBP22694 351 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 ACAT1P24752 427 aaKnown RBP3.14□□□□□ -1.91
PTPRK-220ENST00000531466 GCH1P30793 250 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 GABRA5P31644 462 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 AP3M2P53677 418 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 PLTPP55058 493 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 ACTN3Q08043 901 aaPredicted RBP3.14□□□□□ -1.91
PTPRK-220ENST00000531466 ZNF177Q13360 481 aaPredicted RBP3.14□□□□□ -1.91
PTPRK-220ENST00000531466 CAMK2DQ13557 499 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 IDI1Q13907 227 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 MAPRE2Q15555 327 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 TRADDQ15628 312 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 ZNF674Q2M3X9 581 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 SMU1Q2TAY7 513 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 MAJINQ3KP22 176 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 SLC35D3Q5M8T2 416 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 TEX35Q5T0J7 233 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 GARNL3Q5VVW2 1013 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 FIGLAQ6QHK4 219 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 MCEMP1Q8IX19 187 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 THNSL1Q8IYQ7 743 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 POC5Q8NA72 575 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 PAPD5Q8NDF8 572 aaKnown RBP3.14□□□□□ -1.91
PTPRK-220ENST00000531466 KIF18AQ8NI77 898 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 AGR3Q8TD06 166 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 GRK7Q8WTQ7 553 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 DEPDC1BQ8WUY9 529 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 PIBF1Q8WXW3 757 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 KRT35Q92764 455 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 LRRC59Q96AG4 307 aaKnown RBP3.14□□□□□ -1.91
PTPRK-220ENST00000531466 SGK3Q96BR1 496 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 MSANTD3Q96H12 275 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 C7orf34Q96L11 122 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 AK8Q96MA6 479 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 RUFY1Q96T51 708 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 TSG101Q99816 390 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 SRSF8Q9BRL6 282 aaKnown RBP3.14□□□□□ -1.91
PTPRK-220ENST00000531466 MXD3Q9BW11 206 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 KRT23Q9C075 422 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 GLT8D2Q9H1C3 349 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 CENPHQ9H3R5 247 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 JPT2Q9H910 190 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 GLRX2Q9NS18 164 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.14□□□□□ -1.91
PTPRK-220ENST00000531466 WSB2Q9NYS7 404 aaPredicted RBP3.14□□□□□ -1.91
PTPRK-220ENST00000531466 ABCD2Q9UBJ2 740 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 FAM153AQ9UHL3 310 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 SATB2Q9UPW6 733 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 C15orf41Q9Y2V0 281 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 ATP8B3O60423 1300 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 WDR19Q8NEZ3 1342 aa3.14□□□□□ -1.91
PTPRK-220ENST00000531466 SBNO1A3KN83 1393 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 A0A1B0GUA9 196 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 OR2A25A4D2G3 310 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 GOLGA6L10A6NI86 522 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 GLOD5A6NK44 160 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 E9PMD0 336 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 DYNC1I1O14576 645 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 OR10H2O60403 315 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 ENTPD3O75355 529 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 CREG1O75629 220 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 PRKAR1AP10644 381 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 RPL9P32969 192 aaKnown RBP3.13□□□□□ -1.91
PTPRK-220ENST00000531466 TRIM23P36406 574 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 SLC15A1P46059 708 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 FNTAP49354 379 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 SUOXP51687 545 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 MRPL12P52815 198 aaKnown RBP3.13□□□□□ -1.91
PTPRK-220ENST00000531466 PNLIPRP2P54317 469 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 SLC12A3P55017 1021 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 ACTR1AP61163 376 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 SSTP61278 116 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 NOP14P78316 857 aaKnown RBP3.13□□□□□ -1.91
PTPRK-220ENST00000531466 RPP38P78345 283 aaKnown RBP3.13□□□□□ -1.91
PTPRK-220ENST00000531466 COTL1Q14019 142 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 BAATQ14032 418 aaPredicted RBP3.13□□□□□ -1.91
PTPRK-220ENST00000531466 TMEM132DQ14C87 1099 aa3.13□□□□□ -1.91
PTPRK-220ENST00000531466 PCLAFQ15004 111 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms