RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PCSK6P29122 969 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 AHRP35869 848 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 PIGAP37287 484 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 SCTRP47872 440 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 TRPC1P48995 793 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 AGFG1P52594 562 aaKnown RBP8.56□□□□□ -1.04
NEDD8-206ENST00000531430 PGGT1BP53609 377 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 STX4Q12846 297 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 RUNX2Q13950 521 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 POU4F3Q15319 338 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 TPSAB1Q15661 275 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 DEFB113Q30KQ7 82 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 FLYWCH1Q4VC44 716 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 ANKRD22Q5VYY1 191 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 LRRC8EQ6NSJ5 796 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 RTL4Q6ZR62 310 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 TMPRSS11BQ86T26 416 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 CTAGE6Q86UF2 777 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 GPALPP1Q8IXQ4 340 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 TMEM132CQ8N3T6 1108 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 LIX1Q8N485 282 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 ANKRD53Q8N9V6 530 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 FAM47BQ8NA70 645 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 ABHD11Q8NFV4 315 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 OR4K1Q8NGD4 311 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 LINC01560Q8TB33 94 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 CALML6Q8TD86 181 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 NEIL2Q969S2 332 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 KIAA1191Q96A73 305 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 SCYL1Q96KG9 808 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 RUNDC3BQ96NL0 473 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 OR4K3Q96R72 315 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 RASL10BQ96S79 203 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 AIF1LQ9BQI0 150 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 ZDHHC11Q9H8X9 412 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 NEUROD4Q9HD90 331 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 SEMA4BQ9NPR2 832 aaPredicted RBP8.56□□□□□ -1.04
NEDD8-206ENST00000531430 DLL4Q9NR61 685 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 HOMER3Q9NSC5 361 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 TAS2R13Q9NYV9 303 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 CBLCQ9ULV8 474 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 MMACHCQ9Y4U1 282 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.56□□□□□ -1.04
NEDD8-206ENST00000531430 JMJD1CQ15652 2540 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 IGKV3D-11A0A0A0MRZ8 115 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 HSPB2A8KAH6 182 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 DVL2O14641 736 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 SMAD7O15105 426 aaKnown RBP8.55□□□□□ -1.04
NEDD8-206ENST00000531430 B3GALT2O43825 422 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 KRT14P02533 472 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 FGGP02679 453 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 GABRA1P14867 456 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 PTMSP20962 102 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 TACR1P25103 407 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 GPR143P51810 404 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 HNRNPFP52597 415 aaKnown RBP8.55□□□□□ -1.04
NEDD8-206ENST00000531430 PLA2G16P53816 162 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 WNT3P56703 355 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 IL2P60568 153 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 STXBP1P61764 594 aaKnown RBP8.55□□□□□ -1.04
NEDD8-206ENST00000531430 KCNJ2P63252 427 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 NKX6-1P78426 367 aaPredicted RBP8.55□□□□□ -1.04
NEDD8-206ENST00000531430 DHX9Q08211 1270 aaKnown RBP8.55□□□□□ -1.04
NEDD8-206ENST00000531430 PDAP1Q13442 181 aaKnown RBP8.55□□□□□ -1.04
NEDD8-206ENST00000531430 HSPB2Q16082 182 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 RIPPLY2Q5TAB7 128 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 OPN5Q6U736 354 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 NXPE4Q6UWF7 544 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 CAND1Q86VP6 1230 aaKnown RBP8.55□□□□□ -1.04
NEDD8-206ENST00000531430 THOC6Q86W42 341 aaKnown RBP8.55□□□□□ -1.04
NEDD8-206ENST00000531430 ARMC10Q8N2F6 343 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 ZNF321PQ8N8H1 164 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 OR5L2Q8NGL0 311 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 OR56A3Q8NH54 315 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 FAM222BQ8WU58 562 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 ATL1Q8WXF7 558 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 RNASE6Q93091 150 aaKnown RBP8.55□□□□□ -1.04
NEDD8-206ENST00000531430 YIPF4Q9BSR8 244 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 REPIN1Q9BWE0 567 aaKnown RBP8.55□□□□□ -1.04
NEDD8-206ENST00000531430 ALOXE3Q9BYJ1 711 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 CLK4Q9HAZ1 481 aaKnown RBP8.55□□□□□ -1.04
NEDD8-206ENST00000531430 PPANQ9NQ55 473 aaKnown RBP8.55□□□□□ -1.04
NEDD8-206ENST00000531430 TRMT1Q9NXH9 659 aaKnown RBP8.55□□□□□ -1.04
NEDD8-206ENST00000531430 B4GALT7Q9UBV7 327 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 SLC22A14Q9Y267 594 aa8.55□□□□□ -1.04
NEDD8-206ENST00000531430 MRPS33Q9Y291 106 aaKnown RBP8.55□□□□□ -1.04
NEDD8-206ENST00000531430 C15orf38-AP3S2A0A0A6YYH1 394 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 ZCWPW2A0A1B0GU75 182 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 A0A1B0GVC2 190 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 TGFBR3LH3BV60 316 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 EIF3FO00303 357 aaPredicted RBP8.54□□□□□ -1.04
NEDD8-206ENST00000531430 ERI3O43414 337 aaKnown RBP8.54□□□□□ -1.04
NEDD8-206ENST00000531430 SUSD5O60279 629 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 TRAPPC6AO75865 159 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 GLSO94925 669 aaPredicted RBP8.54□□□□□ -1.04
NEDD8-206ENST00000531430 ATE1O95260 518 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 LY6G6DO95868 133 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 IGHG3P01860 377 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 SERPINA6P08185 405 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 SMIM10L1P0DMW3 83 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms