RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 OCSTAMPQ9BR26 566 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 TMEM109Q9BVC6 243 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 ELOVL4Q9GZR5 314 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 LRRC19Q9H756 370 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 BPIFA1Q9NP55 256 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 PRDM9Q9NQV7 894 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 ITM2CQ9NQX7 267 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 PDLIM7Q9NR12 457 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 ABCB8Q9NUT2 735 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 SMPD4Q9NXE4 827 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 TP53TG5Q9Y2B4 290 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 CHD4Q14839 1912 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 A0A1W2PRB8 838 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 TCRBV9S1A1TA0A576 114 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 A6NHS1 94 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 PCDH17O14917 1159 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 DNAJB5O75953 348 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 ACTL6BO94805 426 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 FGF1P05230 155 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 MYCLP1P12525 358 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 BPIP17213 487 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 FRKP42685 505 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 RPS3AP61247 264 aaKnown RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 PSPHP78330 225 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 GBE1Q04446 702 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 TUSC3Q13454 348 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 GALNT10Q86SR1 603 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 FAM86B1Q8N7N1 296 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 KDM1BQ8NB78 822 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 OR2T35Q8NGX2 323 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 SLC13A3Q8WWT9 602 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 OR8D1Q8WZ84 308 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 PNPLA2Q96AD5 504 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 ZNF486Q96H40 463 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 EPYCQ99645 322 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 OSMRQ99650 979 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 HINT2Q9BX68 163 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 CACNG6Q9BXT2 260 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 HIPK2Q9H2X6 1198 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 TEX10Q9NXF1 929 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 TAS2R8Q9NYW2 309 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 NUDT4Q9NZJ9 180 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 COPS7AQ9UBW8 275 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 SIX4Q9UIU6 781 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 PCDHB1Q9Y5F3 818 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 PCDHGA1Q9Y5H4 931 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 A0A1W2PPM1 405 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 FAM234BA2RU67 622 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 NPEPPSL1A6NEC2 478 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 DUXAA6NLW8 204 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 CYTIPO60759 359 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 FMO6PO60774 539 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 PRAMEF2O60811 474 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 MITFO75030 526 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 RFPL3O75679 317 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 HNRNPA1P09651 372 aaKnown RBP eCLIP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 CD52P31358 61 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 RFX5P48382 616 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 OGDHQ02218 1023 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 LCP2Q13094 533 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 BTN1A1Q13410 526 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 LRRC26Q2I0M4 334 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 COQ5Q5HYK3 327 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 PHYHD1Q5SRE7 291 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 MED27Q6P2C8 311 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 CFAP77Q6ZQR2 320 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 FAM109AQ8N4B1 249 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 LRRN4CLQ8ND94 238 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 OR4C15Q8NGM1 316 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 OR10R2Q8NGX6 335 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 MAPK15Q8TD08 544 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 THEM6Q8WUY1 208 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 TRUB1Q8WWH5 349 aaKnown RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 PMEPA1Q969W9 287 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 PAPOLGQ9BWT3 736 aaKnown RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 NIT2Q9NQR4 276 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 POLE4Q9NR33 117 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 ACSL6Q9UKU0 697 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 NDRG2Q9UN36 371 aaKnown RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 FBXO7Q9Y3I1 522 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 PCDHGA7Q9Y5G6 932 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 LOC100130705A0A1B0GUX0 176 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 EPHB6O15197 1021 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 LRRTM2O43300 516 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 KCNK2O95069 426 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 HTR3BO95264 441 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 PLGP00747 810 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 C2P06681 752 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 RPL10P27635 214 aaKnown RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 LEPRP48357 1165 aaKnown RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 CAV2P51636 162 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 EEFSECP57772 596 aaKnown RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 CD47Q08722 323 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 HSPB3Q12988 150 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 HNRNPDQ14103 355 aaKnown RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 SF1Q15637 639 aaKnown RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 PDSS1Q5T2R2 415 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 SLC27A1Q6PCB7 646 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 C16orf59Q7L2K0 433 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 RTL10Q7L3V2 364 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms