RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 CYP4X1Q8N118 509 aa16.01■□□□□ 0.15
CCS-205ENST00000530384 FAM47BQ8NA70 645 aa16.01■□□□□ 0.15
CCS-205ENST00000530384 OR52B6Q8NGF0 335 aa16.01■□□□□ 0.15
CCS-205ENST00000530384 WDR20Q8TBZ3 569 aa16.01■□□□□ 0.15
CCS-205ENST00000530384 HAS2Q92819 552 aa16.01■□□□□ 0.15
CCS-205ENST00000530384 ZNF354BQ96LW1 612 aa16.01■□□□□ 0.15
CCS-205ENST00000530384 NSUN5Q96P11 429 aaKnown RBP16.01■□□□□ 0.15
CCS-205ENST00000530384 RNF32Q9H0A6 362 aa16.01■□□□□ 0.15
CCS-205ENST00000530384 KCNK13Q9HB14 408 aa16.01■□□□□ 0.15
CCS-205ENST00000530384 ZBTB26Q9HCK0 441 aa16.01■□□□□ 0.15
CCS-205ENST00000530384 SEMA4BQ9NPR2 832 aaPredicted RBP16.01■□□□□ 0.15
CCS-205ENST00000530384 NECTIN3Q9NQS3 549 aa16.01■□□□□ 0.15
CCS-205ENST00000530384 PPT2Q9UMR5 302 aa16.01■□□□□ 0.15
CCS-205ENST00000530384 CSAG2Q9Y5P2 127 aa16.01■□□□□ 0.15
CCS-205ENST00000530384 SHANK1Q9Y566 2161 aa16■□□□□ 0.15
CCS-205ENST00000530384 SAGE2PA6NJ88 616 aa16■□□□□ 0.15
CCS-205ENST00000530384 ESPNB1AK53 854 aa16■□□□□ 0.15
CCS-205ENST00000530384 FOXE1O00358 373 aaPredicted RBP16■□□□□ 0.15
CCS-205ENST00000530384 RTCAO00442 366 aaKnown RBP16■□□□□ 0.15
CCS-205ENST00000530384 CYR61O00622 381 aa16■□□□□ 0.15
CCS-205ENST00000530384 VPS4BO75351 444 aa16■□□□□ 0.15
CCS-205ENST00000530384 OTCP00480 354 aa16■□□□□ 0.15
CCS-205ENST00000530384 KRT15P19012 456 aa16■□□□□ 0.15
CCS-205ENST00000530384 RPS13P62277 151 aaKnown RBP16■□□□□ 0.15
CCS-205ENST00000530384 VSNL1P62760 191 aa16■□□□□ 0.15
CCS-205ENST00000530384 HERVK_113P63132 956 aa16■□□□□ 0.15
CCS-205ENST00000530384 ZNF33BQ06732 778 aa16■□□□□ 0.15
CCS-205ENST00000530384 TRAF3Q13114 568 aa16■□□□□ 0.15
CCS-205ENST00000530384 CUL3Q13618 768 aa16■□□□□ 0.15
CCS-205ENST00000530384 ZNF169Q14929 603 aaPredicted RBP16■□□□□ 0.15
CCS-205ENST00000530384 TERF2Q15554 542 aa16■□□□□ 0.15
CCS-205ENST00000530384 GGTA1PQ4G0N0 100 aa16■□□□□ 0.15
CCS-205ENST00000530384 MILR1Q7Z6M3 343 aa16■□□□□ 0.15
CCS-205ENST00000530384 SLC22A9Q8IVM8 553 aa16■□□□□ 0.15
CCS-205ENST00000530384 C7orf57Q8NEG2 295 aa16■□□□□ 0.15
CCS-205ENST00000530384 ZNF483Q8TF39 744 aaPredicted RBP16■□□□□ 0.15
CCS-205ENST00000530384 CDK15Q96Q40 435 aa16■□□□□ 0.15
CCS-205ENST00000530384 ERVK-6Q9BXR3 956 aa16■□□□□ 0.15
CCS-205ENST00000530384 STMN3Q9NZ72 180 aa16■□□□□ 0.15
CCS-205ENST00000530384 KCMF1Q9P0J7 381 aa16■□□□□ 0.15
CCS-205ENST00000530384 ABI3Q9P2A4 366 aa16■□□□□ 0.15
CCS-205ENST00000530384 VPS4AQ9UN37 437 aa16■□□□□ 0.15
CCS-205ENST00000530384 PCDHGA10Q9Y5H3 936 aa16■□□□□ 0.15
CCS-205ENST00000530384 A8MUI8 341 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 SAP18O00422 153 aaKnown RBP15.99■□□□□ 0.15
CCS-205ENST00000530384 CTNSO60931 367 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 CDH16O75309 829 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 GLRA3O75311 464 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 ATP5F1P24539 256 aaPredicted RBP15.99■□□□□ 0.15
CCS-205ENST00000530384 HSD17B3P37058 310 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 SLCO1A2P46721 670 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 HNRNPFP52597 415 aaKnown RBP15.99■□□□□ 0.15
CCS-205ENST00000530384 MEP1AQ16819 746 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 FRG2Q64ET8 278 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 TTC19Q6DKK2 380 aaPredicted RBP15.99■□□□□ 0.15
CCS-205ENST00000530384 WDR93Q6P2C0 686 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 ZCCHC7Q8N3Z6 543 aaKnown RBP15.99■□□□□ 0.15
CCS-205ENST00000530384 RNF175Q8N4F7 328 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 SLC5A8Q8N695 610 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 GALNT11Q8NCW6 608 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 TMEM52Q8NDY8 209 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 OR4F6Q8NGB9 312 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 ELP5Q8TE02 316 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 SNRNP40Q96DI7 357 aaKnown RBP15.99■□□□□ 0.15
CCS-205ENST00000530384 FRG2BQ96QU4 278 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 CSF3RQ99062 836 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 SERPINI1Q99574 410 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 MAPKAP1Q9BPZ7 522 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 SLC29A3Q9BZD2 475 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 MS4A12Q9NXJ0 267 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 MAP10Q9P2G4 905 aa15.99■□□□□ 0.15
CCS-205ENST00000530384 RP1L1Q8IWN7 2480 aaPredicted RBP15.99■□□□□ 0.15
CCS-205ENST00000530384 TRAV17A0A0B4J275 112 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 A0A1W2PPM1 405 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 SMIM23A6NLE4 172 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 PLPP1O14494 284 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 DLX3O60479 287 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 SUPT7LO94864 414 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 WDPCPO95876 746 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 CPN2P22792 545 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 CCT5P48643 541 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 TNFSF10P50591 281 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 NEK2P51955 445 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 CDH13P55290 713 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 CLCQ05315 142 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 IFT88Q13099 833 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 SLAMF1Q13291 335 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 PRR30Q53SZ7 412 aaPredicted RBP15.98■□□□□ 0.15
CCS-205ENST00000530384 ACER2Q5QJU3 275 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 ZNF678Q5SXM1 525 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 EMBQ6PCB8 327 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 LGI4Q8N135 537 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 CISD2Q8N5K1 135 aaKnown RBP15.98■□□□□ 0.15
CCS-205ENST00000530384 AMER2Q8N7J2 671 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 MYRIPQ8NFW9 859 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 OR1N1Q8NGS0 311 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 EPS8L3Q8TE67 593 aaKnown RBP15.98■□□□□ 0.15
CCS-205ENST00000530384 ELOVL6Q9H5J4 265 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 ADAP2Q9NPF8 381 aa15.98■□□□□ 0.15
CCS-205ENST00000530384 PNO1Q9NRX1 252 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms