RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 MR1Q95460 341 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 POT1Q9NUX5 634 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 TOR4AQ9NXH8 423 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 TAAR2Q9P1P5 351 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 PTGFRNQ9P2B2 879 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 PDLIM1O00151 329 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 E2F3O00716 465 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 BCAT2O15382 392 aaPredicted RBP14.42□□□□□ -0.1
USP47-207ENST00000527733 CLEC3AO75596 197 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 PORP16435 677 aaPredicted RBP14.42□□□□□ -0.1
USP47-207ENST00000527733 KDELR2P33947 212 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 PPP1R8Q12972 351 aaKnown RBP14.42□□□□□ -0.1
USP47-207ENST00000527733 TCTN1Q2MV58 587 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 NDUFAF5Q5TEU4 345 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 OR10H5Q8NGA6 315 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 FAM25AB3EWG3 89 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 FAM25CB3EWG5 89 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 FAM25GB3EWG6 89 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 MED26O95402 600 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 CAPN3P20807 821 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 FBLP22087 321 aaKnown RBP14.41□□□□□ -0.1
USP47-207ENST00000527733 POU6F2P78424 691 aaPredicted RBP14.41□□□□□ -0.1
USP47-207ENST00000527733 SIM1P81133 766 aaPredicted RBP14.41□□□□□ -0.1
USP47-207ENST00000527733 BNC1Q01954 994 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 ST3GAL3Q11203 375 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 MERTKQ12866 999 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 DEFB110Q30KQ9 67 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 BCL7AQ4VC05 210 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 SBSNQ6UWP8 590 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 GALNT12Q8IXK2 581 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 TMEM156Q8N614 296 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 KIAA1958Q8N8K9 716 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 OR4C6Q8NH72 309 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.41□□□□□ -0.12e-9■■■■■ 34.5
USP47-207ENST00000527733 ACPTQ9BZG2 426 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 NUAK2Q9H093 628 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 KCNK13Q9HB14 408 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 SLC35C2Q9NQQ7 365 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 SARDHQ9UL12 918 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 IQCHQ86VS3 1027 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 AMER2Q8N7J2 671 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 BBS10Q8TAM1 723 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 RFKQ969G6 155 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 ZNF707Q96C28 371 aaPredicted RBP14.41□□□□□ -0.1
USP47-207ENST00000527733 SPATA9Q9BWV2 254 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 TMEM168Q9H0V1 697 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 P2RY12Q9H244 342 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 EURLQ9NYK6 297 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 HMX2A2RU54 273 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 SOX30O94993 753 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 SEMA3DO95025 777 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 C9P02748 559 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 LYNP07948 512 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 OR12D1P0DN82 309 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 GLULP15104 373 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 FAM91A1Q658Y4 838 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 KAT2AQ92830 837 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 TBC1D17Q9HA65 648 aa14.41□□□□□ -0.1
USP47-207ENST00000527733 PAPOLBQ9NRJ5 636 aaKnown RBP14.41□□□□□ -0.1
USP47-207ENST00000527733 AP1G1O43747 822 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 PEX11BO96011 259 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 SDC1P18827 310 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 C12orf40Q86WS4 652 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 CLECL1Q8IZS7 167 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 DAZLQ92904 295 aaKnown RBP14.4□□□□□ -0.1
USP47-207ENST00000527733 GIN1Q9NXP7 522 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 KPNA4O00629 521 aaPredicted RBP14.4□□□□□ -0.1
USP47-207ENST00000527733 GNB5O14775 395 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 FZD6O60353 706 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 SLCO2B1O94956 709 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 ZNF24P17028 368 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 IMPA1P29218 277 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 BLVRAP53004 296 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 ADPRHP54922 357 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 ADAM15Q13444 863 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 CGB2Q6NT52 195 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 ZCCHC7Q8N3Z6 543 aaKnown RBP14.4□□□□□ -0.1
USP47-207ENST00000527733 OR2L5Q8NG80 312 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 MPP4Q96JB8 637 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 C11orf16Q9NQ32 467 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 FTSJ1Q9UET6 329 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 PTPRZ1P23471 2315 aaPredicted RBP14.4□□□□□ -0.1
USP47-207ENST00000527733 MAP1BP46821 2468 aaKnown RBP14.4□□□□□ -0.1
USP47-207ENST00000527733 PNMA8CA0A1B0GUJ8 204 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 DIRAS1O95057 198 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 MAGEA12P43365 314 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 ZC3H14Q6PJT7 736 aaKnown RBP14.4□□□□□ -0.1
USP47-207ENST00000527733 C3orf30Q96M34 536 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 NKX1-2Q9UD57 310 aaPredicted RBP14.4□□□□□ -0.1
USP47-207ENST00000527733 PLCL2Q9UPR0 1127 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 TP73O15350 636 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 GSTM3P21266 225 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 CASRP41180 1078 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 SHC2P98077 582 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 TAP2Q03519 686 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 AHSA2Q719I0 299 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 ZNF551Q7Z340 670 aaPredicted RBP14.4□□□□□ -0.1
USP47-207ENST00000527733 KBTBD8Q8NFY9 601 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 OSBPL10Q9BXB5 764 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 TM9SF3Q9HD45 589 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms