RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 ZCCHC14Q8WYQ9 949 aaKnown RBP10.15□□□□□ -0.78
NEDD8-205ENST00000527046 ANKRD9Q96BM1 317 aaPredicted RBP10.15□□□□□ -0.78
NEDD8-205ENST00000527046 SLC45A3Q96JT2 553 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 MAELQ96JY0 434 aaKnown RBP10.15□□□□□ -0.78
NEDD8-205ENST00000527046 EGLN2Q96KS0 407 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 FAM117AQ9C073 453 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 ACTL8Q9H568 366 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 CCDC134Q9H6E4 229 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 WDR54Q9H977 334 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 MEAF6Q9HAF1 191 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 KCNK13Q9HB14 408 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 LYRM4Q9HD34 91 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 MKKSQ9NPJ1 570 aaPredicted RBP10.15□□□□□ -0.78
NEDD8-205ENST00000527046 HEY2Q9UBP5 337 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 ZNF282Q9UDV7 671 aaPredicted RBP10.15□□□□□ -0.78
NEDD8-205ENST00000527046 CES1P1Q9UKY3 287 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 DLGAP4Q9Y2H0 992 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 IGF2RP11717 2491 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 CELSR3Q9NYQ7 3312 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 IGKV3D-11A0A0A0MRZ8 115 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 A0A1W2PS29 197 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 TMEM8BA6NDV4 472 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 SRRM3A6NNA2 597 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 MASP2O00187 686 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 PGRMC2O15173 223 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 B3GALT2O43825 422 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 EDF1O60869 148 aaKnown RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 SKAP2O75563 359 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 CREG1O75629 220 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 RSL1D1O76021 490 aaKnown RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 FAM58BPP0C7Q3 252 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 NEFHP12036 1026 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 ALOX15P16050 662 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 MDH1P40925 334 aaKnown RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 RAB38P57729 211 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 PHEXP78562 749 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 HSP90B2PQ58FF3 399 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 ATP1A1-AS1Q5TC04 95 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 TMEM205Q6UW68 189 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 LARP4Q71RC2 724 aaKnown RBP eCLIP10.14□□□□□ -0.792e-13■■■■■ 29.6
NEDD8-205ENST00000527046 PPP1R32Q7Z5V6 425 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 SCUBE1Q8IWY4 988 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 PRSS58Q8IYP2 241 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 PIWIL2Q8TC59 973 aaKnown RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 NUDT8Q8WV74 236 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 SNRNP27Q8WVK2 155 aaKnown RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 SREK1Q8WXA9 508 aaKnown RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 TBC1D20Q96BZ9 403 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 CRELD1Q96HD1 420 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 METTL2AQ96IZ6 378 aaKnown RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 ZNF317Q96PQ6 595 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 CCNL2Q96S94 520 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 NUF2Q9BZD4 464 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 VN1R1Q9GZP7 353 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 SOX17Q9H6I2 414 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 WDR55Q9H6Y2 383 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 AKTIPQ9H8T0 292 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 GPN2Q9H9Y4 310 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 NECTIN3Q9NQS3 549 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 TEX10Q9NXF1 929 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 MARCOQ9UEW3 520 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 MCM8Q9UJA3 840 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 FBXW2Q9UKT8 454 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 ZMIZ1Q9ULJ6 1067 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 PTRH2Q9Y3E5 179 aaKnown RBP10.14□□□□□ -0.79
NEDD8-205ENST00000527046 HS3ST3B1Q9Y662 390 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 DMXL2Q8TDJ6 3036 aa10.14□□□□□ -0.79
NEDD8-205ENST00000527046 CHD8Q9HCK8 2581 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 A0A1W2PQ72 361 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 IDSB3KWA1 339 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 TCP11X1B4DZS4 312 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 SOCS6O14544 535 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 B4GALT2O60909 372 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 PEX11AO75192 247 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 FHP07954 510 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 KITP10721 976 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 PIM1P11309 404 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-205ENST00000527046 IL10P22301 178 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 TIA1P31483 386 aaKnown RBP eCLIP10.13□□□□□ -0.79
NEDD8-205ENST00000527046 SSR2P43308 183 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 RAP1GDS1P52306 607 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 IGLV3-21P80748 117 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-205ENST00000527046 MC1RQ01726 317 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 PDCD2Q16342 344 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-205ENST00000527046 TUBB8Q3ZCM7 444 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 SLC9B1Q4ZJI4 515 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 NIPAL1Q6NVV3 410 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 NOXRED1Q6NXP6 359 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 EPGNQ6UW88 154 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 KIRREL2Q6UWL6 708 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 FAM47EQ6ZV65 393 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 GPR180Q86V85 440 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 NUDT13Q86X67 352 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 ARFGAP2Q8N6H7 521 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 DNAJB14Q8TBM8 379 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 LRRC8CQ8TDW0 803 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 C16orf78Q8WTQ4 265 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 TSLPQ969D9 159 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 MIEF2Q96C03 454 aa10.13□□□□□ -0.79
NEDD8-205ENST00000527046 C19orf60Q96EN9 201 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms