RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 CTSKP43235 329 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 TMEM52BQ4KMG9 183 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 TCEAL5Q5H9L2 206 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 VN1R5Q7Z5H4 357 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 PDZD3Q86UT5 571 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 UTP15Q8TED0 518 aaKnown RBP20.27■□□□□ 0.84
VPS28-205ENST00000526204 COL21A1Q96P44 957 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 MAPKAP1Q9BPZ7 522 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 BTBD2Q9BX70 525 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 ALOXE3Q9BYJ1 711 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 DCSTAMPQ9H295 470 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 ZNF226Q9NYT6 803 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 BOLA2-SMG1P6H3BVE0 249 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 IFNW1P05000 195 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 EPCAMP16422 314 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 TPP2P29144 1249 aaPredicted RBP20.27■□□□□ 0.84
VPS28-205ENST00000526204 SLC19A1P41440 591 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 SYT16Q17RD7 645 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 PRSS53Q2L4Q9 553 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 PAGE2Q7Z2X7 111 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 DCUN1D3Q8IWE4 304 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 STX19Q8N4C7 294 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 NXPE3Q969Y0 559 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 PDXPQ96GD0 296 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 CRELD1Q96HD1 420 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 DYRK4Q9NR20 520 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 DOLKQ9UPQ8 538 aa20.27■□□□□ 0.84
VPS28-205ENST00000526204 MRPS23Q9Y3D9 190 aaKnown RBP20.27■□□□□ 0.84
VPS28-205ENST00000526204 MTCL1Q9Y4B5 1905 aaKnown RBP20.27■□□□□ 0.84
VPS28-205ENST00000526204 TRBC2A0A5B9 178 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 ANKDD1BA6NHY2 528 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 M0R082 166 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 MPZL2O60487 215 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 TBX19O60806 448 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 ALOX5P09917 674 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 DDCP20711 480 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 CXCR2P25025 360 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 CDC42P60953 191 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 ARHGAP19Q14CB8 494 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 C11orf96Q7Z7L8 435 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 C17orf64Q86WR6 236 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 ETFBKMTQ8IXQ9 262 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 OR9Q2Q8NGE9 314 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 MCFD2Q8NI22 146 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 SPPL3Q8TCT6 385 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 FAM129BQ96TA1 746 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 MMP27Q9H306 513 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 RHBGQ9H310 441 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 DUSP12Q9UNI6 340 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 PRRT4C9JH25 899 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 J3KTA2 159 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 PCDH17O14917 1159 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 HSD17B2P37059 387 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 OLR1P78380 273 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 DEPDC1Q5TB30 811 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 FAM83HQ6ZRV2 1179 aaPredicted RBP20.26■□□□□ 0.83
VPS28-205ENST00000526204 USP43Q70EL4 1123 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 ERN2Q76MJ5 926 aaKnown RBP20.26■□□□□ 0.83
VPS28-205ENST00000526204 ZNF675Q8TD23 568 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 OR5P2Q8WZ92 322 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 FAM210AQ96ND0 272 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 IL17FQ96PD4 163 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 DSN1Q9H410 356 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 C11orf49Q9H6J7 331 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 CXorf36Q9H7Y0 433 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 PELI2Q9HAT8 420 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 AMBNQ9NP70 447 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 SNX8Q9Y5X2 465 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 A3GALT2U3KPV4 340 aa20.26■□□□□ 0.83
VPS28-205ENST00000526204 SH3D21A4FU49 640 aa20.25■□□□□ 0.83
VPS28-205ENST00000526204 RPN2P04844 631 aa20.25■□□□□ 0.83
VPS28-205ENST00000526204 CBLP22681 906 aa20.25■□□□□ 0.83
VPS28-205ENST00000526204 SERPINB1P30740 379 aa20.25■□□□□ 0.83
VPS28-205ENST00000526204 PERM1Q5SV97 790 aa20.25■□□□□ 0.83
VPS28-205ENST00000526204 KHDRBS2Q5VWX1 349 aaKnown RBP20.25■□□□□ 0.83
VPS28-205ENST00000526204 CEACAM20Q6UY09 585 aa20.25■□□□□ 0.83
VPS28-205ENST00000526204 SLC46A3Q7Z3Q1 461 aa20.25■□□□□ 0.83
VPS28-205ENST00000526204 AMZ2Q86W34 360 aa20.25■□□□□ 0.83
VPS28-205ENST00000526204 OR5AR1Q8NGP9 310 aa20.25■□□□□ 0.83
VPS28-205ENST00000526204 C9orf43Q8TAL5 461 aaPredicted RBP20.25■□□□□ 0.83
VPS28-205ENST00000526204 NEURL3Q96EH8 262 aa20.25■□□□□ 0.83
VPS28-205ENST00000526204 NEURL2Q9BR09 285 aa20.25■□□□□ 0.83
VPS28-205ENST00000526204 TMEM121BQ9BXQ6 578 aaPredicted RBP20.25■□□□□ 0.83
VPS28-205ENST00000526204 A4GALTQ9NPC4 353 aa20.25■□□□□ 0.83
VPS28-205ENST00000526204 GPR83Q9NYM4 423 aa20.25■□□□□ 0.83
VPS28-205ENST00000526204 TMEM247A6NEH6 219 aa20.24■□□□□ 0.83
VPS28-205ENST00000526204 C5orf58C9J3I9 102 aa20.24■□□□□ 0.83
VPS28-205ENST00000526204 PLK4O00444 970 aa20.24■□□□□ 0.83
VPS28-205ENST00000526204 PLPP1O14494 284 aa20.24■□□□□ 0.83
VPS28-205ENST00000526204 RPLP0P05388 317 aaKnown RBP20.24■□□□□ 0.83
VPS28-205ENST00000526204 IMPDH2P12268 514 aa20.24■□□□□ 0.83
VPS28-205ENST00000526204 MAPK12P53778 367 aa20.24■□□□□ 0.83
VPS28-205ENST00000526204 HEPACAMQ14CZ8 416 aa20.24■□□□□ 0.83
VPS28-205ENST00000526204 ZNF404Q494X3 552 aa20.24■□□□□ 0.83
VPS28-205ENST00000526204 CYP27C1Q4G0S4 372 aa20.24■□□□□ 0.83
VPS28-205ENST00000526204 SAXO2Q658L1 398 aa20.24■□□□□ 0.83
VPS28-205ENST00000526204 RBM12BQ8IXT5 1001 aaKnown RBP20.24■□□□□ 0.83
VPS28-205ENST00000526204 TFGQ92734 400 aaPredicted RBP20.24■□□□□ 0.83
VPS28-205ENST00000526204 DACH2Q96NX9 599 aa20.24■□□□□ 0.83
VPS28-205ENST00000526204 QRFPRQ96P65 431 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms