RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 PPT2Q9UMR5 302 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 TP53TG5Q9Y2B4 290 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 PLLPQ9Y342 182 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ACTL7BQ9Y614 415 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 EPG5Q9HCE0 2579 aa5.09□□□□□ -1.6
HMGB1P40-201ENST00000525121 AHCTF1Q8WYP5 2266 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 LOC102723996A0A087X1L8 192 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 A0A1W2PQ72 361 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 C4orf51C9J302 202 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 RTCAO00442 366 aaKnown RBP5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 MANBAO00462 879 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 PLPP1O14494 284 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 OR10H2O60403 315 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 NPHS1O60500 1241 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 MYO1DO94832 1006 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 SEC24DO94855 1032 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 SNUPNO95149 360 aaKnown RBP5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 SCELO95171 688 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 PDYNP01213 254 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 IFNA16P05015 189 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 SERPINA7P05543 415 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 FAM58BPP0C7Q3 252 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 NR2F6P10588 404 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 UROSP10746 265 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 COX6A1P12074 109 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 TNNI3P19429 210 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 MAOAP21397 527 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 CASRP41180 1078 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 NEK2P51955 445 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 MAPK12P53778 367 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 LIM2P55344 173 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 PLIN5Q00G26 463 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 RHAGQ02094 409 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 TNFRSF17Q02223 184 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 ACSM2AQ08AH3 577 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 KLRB1Q12918 225 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 BIKQ13323 160 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 RAPSNQ13702 412 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 RUNX2Q13950 521 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 SERTAD2Q14140 314 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 CASP8Q14790 479 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 PCLAFQ15004 111 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 TERF2Q15554 542 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 SPIN4Q56A73 249 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 SFT2D3Q587I9 215 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 CRB2Q5IJ48 1285 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 SPDYAQ5MJ70 313 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 BEND6Q5SZJ8 279 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 CCNYL2Q5T2Q4 361 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 ABHD17BQ5VST6 288 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 HHATQ5VTY9 493 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 ACSM2BQ68CK6 577 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 PLAG1Q6DJT9 500 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 PAPD4Q6PIY7 484 aaKnown RBP5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 TMEM205Q6UW68 189 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 LANCL3Q6ZV70 420 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 SH2D5Q6ZV89 423 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 RPS27LQ71UM5 84 aaKnown RBP5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 HDXQ7Z353 690 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 PRICKLE2Q7Z3G6 844 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 GPR180Q86V85 440 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 NUDCD3Q8IVD9 361 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 C10orf107Q8IVU9 208 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 PARP9Q8IXQ6 854 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 KIRREL3Q8IZU9 778 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 IQCKQ8N0W5 287 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZADH2Q8N4Q0 377 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLC5A8Q8N695 610 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 EXD3Q8N9H8 876 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 PLPP5Q8NEB5 264 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 FDCSPQ8NFU4 85 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 SUN3Q8TAQ9 357 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 WDR20Q8TBZ3 569 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 AGAP11Q8TF27 550 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 TANKQ92844 425 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 TSLPQ969D9 159 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 CNDP1Q96KN2 507 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 PELOQ9BRX2 385 aaKnown RBP5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 FAIM2Q9BWQ8 316 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 TRIM55Q9BYV6 548 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 GSTO2Q9H4Y5 243 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 RPF2Q9H7B2 306 aaKnown RBP5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 KCNK13Q9HB14 408 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 ADAP2Q9NPF8 381 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 RRAGDQ9NQL2 400 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 PRDM7Q9NQW5 492 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZNF71Q9NQZ8 489 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 LANCL2Q9NS86 450 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 C5AR2Q9P296 337 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLC17A7Q9P2U7 560 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 VPS29Q9UBQ0 182 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 COPS7AQ9UBW8 275 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 ANAPC2Q9UJX6 822 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 FBXW2Q9UKT8 454 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 DAPP1Q9UN19 280 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 CLCA3PQ9Y6N3 262 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 PKD1L2Q7Z442 2459 aa5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 ANKRD11Q6UB99 2663 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P40-201ENST00000525121 FRYQ5TBA9 3013 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 A0A0A6YYD5 115 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms