RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 EFNA1P20827 205 aaPredicted RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 HIST1H1TP22492 207 aaPredicted RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 TACR1P25103 407 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 TPP2P29144 1249 aaPredicted RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 PIK3CBP42338 1070 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 KRT6CP48668 564 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 ALDH9A1P49189 494 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 EMP3P54852 163 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 RAB38P57729 211 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 OR4D2P58180 307 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 PPP2R2AP63151 447 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 RPL38P63173 70 aaKnown RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 RAE1P78406 368 aaKnown RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 RHAGQ02094 409 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 Q0VFX4 171 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 ASPHQ12797 758 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 SLC13A2Q13183 592 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 LY6DQ14210 128 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 NR6A1Q15406 480 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 NSDHLQ15738 373 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 TBR1Q16650 682 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 UGT8Q16880 541 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 PRSS53Q2L4Q9 553 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 UGT3A2Q3SY77 523 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 GGTA1PQ4G0N0 100 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 SFT2D3Q587I9 215 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 YOD1Q5VVQ6 348 aaPredicted RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 KANK2Q63ZY3 851 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 FCRLBQ6BAA4 426 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 ANKRD26P1Q6NSI1 321 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 METTL2BQ6P1Q9 378 aaKnown RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 CYP20A1Q6UW02 462 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 KIRREL2Q6UWL6 708 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 DGAT2L6Q6ZPD8 337 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 Q6ZSR9 355 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 MRGPREQ86SM8 312 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 GPR180Q86V85 440 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 CLYBLQ8N0X4 340 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF321PQ8N8H1 164 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 ZSCAN1Q8NBB4 408 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 OR6Y1Q8NGX8 325 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 ADAMTS17Q8TE56 1095 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 CHTF18Q8WVB6 975 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 DYDC1Q8WWB3 177 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 FKBP10Q96AY3 582 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 TBC1D20Q96BZ9 403 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 EGLN2Q96KS0 407 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 MARK4Q96L34 752 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 PTCHD1Q96NR3 888 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 KCNC2Q96PR1 638 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 SERPINI1Q99574 410 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 TBCDQ9BTW9 1192 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 C1orf50Q9BV19 199 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 GPR87Q9BY21 358 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 SLC29A3Q9BZD2 475 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 NUF2Q9BZD4 464 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 PITHD1Q9GZP4 211 aaPredicted RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 SLC26A1Q9H2B4 701 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 ACBD3Q9H3P7 528 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 PRORYQ9H606 182 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 WDR55Q9H6Y2 383 aaPredicted RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 MANSC1Q9H8J5 431 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 ANKRA2Q9H9E1 313 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 LIN28AQ9H9Z2 209 aaKnown RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 MKKSQ9NPJ1 570 aaPredicted RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 PRTFDC1Q9NRG1 225 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 PNO1Q9NRX1 252 aaKnown RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 INTS9Q9NV88 658 aaKnown RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 P4HTMQ9NXG6 502 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 KCMF1Q9P0J7 381 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 VPS29Q9UBQ0 182 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 BAIAP2L1Q9UHR4 511 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 ADGRE2Q9UHX3 823 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 KCND3Q9UK17 655 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 FBXL4Q9UKA2 621 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 DAPP1Q9UN19 280 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 MAN2B2Q9Y2E5 1009 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 DLGAP4Q9Y2H0 992 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 CCL27Q9Y4X3 112 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 PCDHGA6Q9Y5G7 932 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 SDK2Q58EX2 2172 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 IGLV3-12A0A075B6K2 115 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 GNG14A0A1W2PPG7 69 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 A8MUI8 341 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 TMEM114B3SHH9 223 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 HRKO00198 91 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 SLC28A1O00337 649 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 PEX12O00623 359 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 PROM1O43490 865 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 PCDH7O60245 1069 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 MAN1A2O60476 641 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 PRMT3O60678 531 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ERAL1O75616 437 aaKnown RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ONECUT2O95948 504 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ALBP02768 609 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 PDGFAP04085 211 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 PRB1P04280 392 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 IFNA16P05015 189 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ANXA4P09525 319 aaPredicted RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 COX6A1P12074 109 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms