RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 HOXA4Q00056 320 aaPredicted RBP6.47□□□□□ -1.37
NEDD8-203ENST00000524927 DNTTIP2Q5QJE6 756 aaKnown RBP6.47□□□□□ -1.37
NEDD8-203ENST00000524927 SYPL2Q5VXT5 272 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 KLHL35Q6PF15 583 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 DOK6Q6PKX4 331 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 TRIM72Q6ZMU5 477 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 DCDC5Q6ZRR9 648 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 RUFY3Q7L099 469 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 ARHGAP12Q8IWW6 846 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 XXYLT1Q8NBI6 393 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 SLC4A11Q8NBS3 891 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 CCDC110Q8TBZ0 833 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 SMPDL3BQ92485 455 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 NUS1Q96E22 293 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 ZNF396Q96N95 335 aaPredicted RBP6.47□□□□□ -1.37
NEDD8-203ENST00000524927 AGAP2Q99490 1192 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 AP1M1Q9BXS5 423 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 SH3BP4Q9P0V3 963 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 PACSIN3Q9UKS6 424 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 HS3ST3B1Q9Y662 390 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 FREM1Q5H8C1 2179 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 LOC100653049A0A140TA62 436 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 LRRIQ3A6PVS8 624 aaPredicted RBP6.46□□□□□ -1.38
NEDD8-203ENST00000524927 TCF21O43680 179 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 BUB1O43683 1085 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 PFKFB2O60825 505 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 KRT34O76011 436 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 LCA5LO95447 670 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 IGSF6O95976 241 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 HPP00738 406 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 CSF1P09603 554 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 CR1P17927 2039 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 GJB2P29033 226 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 UBA7P41226 1012 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 CASP4P49662 377 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 RAD23BP54727 409 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 DCDP81605 110 aaKnown RBP6.46□□□□□ -1.38
NEDD8-203ENST00000524927 GNA12Q03113 381 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.46□□□□□ -1.38
NEDD8-203ENST00000524927 GAB1Q13480 694 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 SQLEQ14534 574 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 CBWD5Q5RIA9 395 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 TMEM88Q6PEY1 159 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 STXBP4Q6ZWJ1 553 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 DPPA4Q7L190 304 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 SLC13A5Q86YT5 568 aaPredicted RBP6.46□□□□□ -1.38
NEDD8-203ENST00000524927 RPRMLQ8N4K4 120 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 RFLNBQ8N5W9 214 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 OR11G2Q8NGC1 345 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 OR1L3Q8NH93 324 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 ZFAND2BQ8WV99 257 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 KCNJ9Q92806 393 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 ZNF641Q96N77 438 aaPredicted RBP6.46□□□□□ -1.38
NEDD8-203ENST00000524927 POT1Q9NUX5 634 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 SLC17A6Q9P2U8 582 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 TMEM98Q9Y2Y6 226 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 ALG6Q9Y672 507 aa6.46□□□□□ -1.38
NEDD8-203ENST00000524927 E7EQ34 232 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 CCER2I3L3R5 266 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 ZNF749O43361 778 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 JTBO76095 146 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 CBSLP0DN79 551 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 ACP5P13686 325 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 TNNT1P13805 278 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 CBSP35520 551 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 PGM1P36871 562 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 CLCNKAP51800 687 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 SNRPFP62306 86 aaKnown RBP6.45□□□□□ -1.38
NEDD8-203ENST00000524927 FBXL19-AS1Q494R0 122 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 TDRD12Q587J7 1177 aaKnown RBP6.45□□□□□ -1.38
NEDD8-203ENST00000524927 CFAP58Q5T655 872 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 PMF1Q6P1K2 205 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 MARK2Q7KZI7 788 aaKnown RBP6.45□□□□□ -1.38
NEDD8-203ENST00000524927 TFAP2DQ7Z6R9 452 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 LAS2Q8IYD9 372 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 ADPRHL1Q8NDY3 354 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 OR10Q1Q8NGQ4 319 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 UBA3Q8TBC4 463 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 SLC35F5Q8WV83 523 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 ZFPM2Q8WW38 1151 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 RNASE6Q93091 150 aaKnown RBP6.45□□□□□ -1.38
NEDD8-203ENST00000524927 HSFY1Q96LI6 401 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 AK8Q96MA6 479 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 FYTTD1Q96QD9 318 aaKnown RBP6.45□□□□□ -1.38
NEDD8-203ENST00000524927 FGFBP2Q9BYJ0 223 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 APOBEC3GQ9HC16 384 aaKnown RBP6.45□□□□□ -1.38
NEDD8-203ENST00000524927 SLC40A1Q9NP59 571 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 AGPAT3Q9NRZ7 376 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 SOHLH2Q9NX45 425 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 ASIC5Q9NY37 505 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 ZNF624Q9P2J8 865 aaPredicted RBP6.45□□□□□ -1.38
NEDD8-203ENST00000524927 C11orf21Q9P2W6 132 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 GNPTGQ9UJJ9 305 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 KCNK6Q9Y257 313 aa6.45□□□□□ -1.38
NEDD8-203ENST00000524927 ROS1P08922 2347 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 A0A1B0GTH9 108 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 TMEM150CB9EJG8 249 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 MGST3O14880 152 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 BMP10O95393 424 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 SERPINA7P05543 415 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms