RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ADAP2Q9NPF8 381 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 PPIEQ9UNP9 301 aaKnown RBP24.05■■□□□ 1.44
PVT1-219ENST00000523427 CLDN16Q9Y5I7 305 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 FAM215AQ9Y5M1 114 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 CLCA3PQ9Y6N3 262 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 A0A0G2JNJ9 132 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 NPEPPSL1A6NEC2 478 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 CDC7O00311 574 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 BCKDKO14874 412 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 B3GALT2O43825 422 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 H2AFYO75367 372 aaKnown RBP24.04■■□□□ 1.44
PVT1-219ENST00000523427 CELA3AP09093 270 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 ENO2P09104 434 aaPredicted RBP24.04■■□□□ 1.44
PVT1-219ENST00000523427 HNRNPH1P31943 449 aaKnown RBP24.04■■□□□ 1.44
PVT1-219ENST00000523427 HSD17B7P56937 341 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 RAB38P57729 211 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 C18orf21Q32NC0 220 aaPredicted RBP24.04■■□□□ 1.44
PVT1-219ENST00000523427 SPANXN3Q5MJ09 141 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 HSDL2Q6YN16 418 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 RGS9BPQ6ZS82 235 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 GK5Q6ZS86 529 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 WDR53Q7Z5U6 358 aaPredicted RBP24.04■■□□□ 1.44
PVT1-219ENST00000523427 TGIF2LYQ8IUE0 185 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 GPALPP1Q8IXQ4 340 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 KLHDC8AQ8IYD2 350 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 TMEM132CQ8N3T6 1108 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 OR8D2Q9GZM6 311 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 SLC24A3Q9HC58 644 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 Q9UFV3 132 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 L3MBTL1Q9Y468 752 aa24.04■■□□□ 1.44
PVT1-219ENST00000523427 ANKHD1Q8IWZ3 2542 aaKnown RBP24.03■■□□□ 1.44
PVT1-219ENST00000523427 TNNI3P19429 210 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 KLK2P20151 261 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 CNR1P21554 472 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 GDF5P43026 501 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 DNASE1L1P49184 302 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 BBS9Q3SYG4 887 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 MSS51Q4VC12 460 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 RTL6Q6ICC9 239 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 FAM47EQ6ZV65 393 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 TRILQ7L0X0 811 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 ZNF321PQ8N8H1 164 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 CHDHQ8NE62 594 aaPredicted RBP24.03■■□□□ 1.44
PVT1-219ENST00000523427 MS4A6EQ96DS6 147 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 CERS2Q96G23 380 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 CFAP36Q96G28 342 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 SCYL1Q96KG9 808 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 CSF3RQ99062 836 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 FOXC2Q99958 501 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 FAM173AQ9BQD7 235 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 CNPPD1Q9BV87 410 aa24.03■■□□□ 1.44
PVT1-219ENST00000523427 MRPS33Q9Y291 106 aaKnown RBP24.03■■□□□ 1.44
PVT1-219ENST00000523427 WDR47O94967 919 aa24.02■■□□□ 1.44
PVT1-219ENST00000523427 TTC4O95801 387 aa24.02■■□□□ 1.44
PVT1-219ENST00000523427 HOXB4P17483 251 aaPredicted RBP24.02■■□□□ 1.44
PVT1-219ENST00000523427 ADH7P40394 386 aa24.02■■□□□ 1.44
PVT1-219ENST00000523427 HK2P52789 917 aa24.02■■□□□ 1.44
PVT1-219ENST00000523427 SLBPQ14493 270 aaKnown RBP eCLIP24.02■■□□□ 1.44
PVT1-219ENST00000523427 ELAVL1Q15717 326 aaKnown RBP24.02■■□□□ 1.44
PVT1-219ENST00000523427 TEDDM1Q5T9Z0 273 aa24.02■■□□□ 1.44
PVT1-219ENST00000523427 RNASEH2BQ5TBB1 312 aaKnown RBP24.02■■□□□ 1.44
PVT1-219ENST00000523427 NDUFAF5Q5TEU4 345 aa24.02■■□□□ 1.44
PVT1-219ENST00000523427 FAM45BPQ6NSW5 357 aa24.02■■□□□ 1.44
PVT1-219ENST00000523427 ARSKQ6UWY0 536 aa24.02■■□□□ 1.44
PVT1-219ENST00000523427 RTL4Q6ZR62 310 aa24.02■■□□□ 1.44
PVT1-219ENST00000523427 IGDCC3Q8IVU1 814 aa24.02■■□□□ 1.44
PVT1-219ENST00000523427 FAM109AQ8N4B1 249 aa24.02■■□□□ 1.44
PVT1-219ENST00000523427 MYRIPQ8NFW9 859 aa24.02■■□□□ 1.44
PVT1-219ENST00000523427 FAM45AQ8TCE6 357 aa24.02■■□□□ 1.44
PVT1-219ENST00000523427 SLCO2A1Q92959 643 aa24.02■■□□□ 1.44
PVT1-219ENST00000523427 GPATCH1Q9BRR8 931 aaKnown RBP24.02■■□□□ 1.44
PVT1-219ENST00000523427 NPLQ9BXD5 320 aaPredicted RBP24.02■■□□□ 1.44
PVT1-219ENST00000523427 PRM3Q9NNZ6 103 aa24.02■■□□□ 1.44
PVT1-219ENST00000523427 OR14I1A6ND48 311 aa24.01■■□□□ 1.43
PVT1-219ENST00000523427 LRIT2A6NDA9 550 aa24.01■■□□□ 1.43
PVT1-219ENST00000523427 CTAG2O75638 210 aa24.01■■□□□ 1.43
PVT1-219ENST00000523427 GLSO94925 669 aaPredicted RBP24.01■■□□□ 1.43
PVT1-219ENST00000523427 C1GALT1C1LP0DN25 315 aa24.01■■□□□ 1.43
PVT1-219ENST00000523427 CERS1P27544 350 aa24.01■■□□□ 1.43
PVT1-219ENST00000523427 MAN2A2P49641 1150 aa24.01■■□□□ 1.43
PVT1-219ENST00000523427 PPP1R7Q15435 360 aa24.01■■□□□ 1.43
PVT1-219ENST00000523427 PPP1R3AQ16821 1122 aa24.01■■□□□ 1.43
PVT1-219ENST00000523427 TMIGD1Q6UXZ0 262 aa24.01■■□□□ 1.43
PVT1-219ENST00000523427 CNTN4Q8IWV2 1026 aa24.01■■□□□ 1.43
PVT1-219ENST00000523427 ZNF595Q8IYB9 648 aa24.01■■□□□ 1.43
PVT1-219ENST00000523427 MMP21Q8N119 569 aa24.01■■□□□ 1.43
PVT1-219ENST00000523427 ALOXE3Q9BYJ1 711 aa24.01■■□□□ 1.43
PVT1-219ENST00000523427 GSX1Q9H4S2 264 aaPredicted RBP24.01■■□□□ 1.43
PVT1-219ENST00000523427 IL1RL2Q9HB29 575 aa24.01■■□□□ 1.43
PVT1-219ENST00000523427 TUBA8Q9NY65 449 aaPredicted RBP24.01■■□□□ 1.43
PVT1-219ENST00000523427 PLEKHA6Q9Y2H5 1048 aa24.01■■□□□ 1.43
PVT1-219ENST00000523427 STX4Q12846 297 aa24■■□□□ 1.43
PVT1-219ENST00000523427 ZNF460Q14592 562 aa24■■□□□ 1.43
PVT1-219ENST00000523427 SLC10A1Q14973 349 aa24■■□□□ 1.43
PVT1-219ENST00000523427 WLSQ5T9L3 541 aa24■■□□□ 1.43
PVT1-219ENST00000523427 DAZLQ92904 295 aaKnown RBP24■■□□□ 1.43
PVT1-219ENST00000523427 SEMA4BQ9NPR2 832 aaPredicted RBP24■■□□□ 1.43
PVT1-219ENST00000523427 SACM1LQ9NTJ5 587 aa24■■□□□ 1.43
PVT1-219ENST00000523427 ZNF358Q9NW07 568 aa24■■□□□ 1.43
PVT1-219ENST00000523427 ST6GALNAC2Q9UJ37 374 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms