RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 CD46P15529 392 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 ZNF10P21506 573 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-223ENST00000523125 EEF1DP29692 281 aaKnown RBP11.55□□□□□ -0.56
VEGFA-223ENST00000523125 ECHS1P30084 290 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 HPDP32754 393 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-223ENST00000523125 TRHRP34981 398 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-223ENST00000523125 OC90Q02509 493 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-223ENST00000523125 SLC13A2Q13183 592 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 SETDB1Q15047 1291 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 ZRSR2Q15696 482 aaKnown RBP11.55□□□□□ -0.56
VEGFA-223ENST00000523125 HIST2H2ACQ16777 129 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-223ENST00000523125 HIST2H2AA3Q6FI13 130 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 GALNTL5Q7Z4T8 443 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 CCDC91Q7Z6B0 441 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 FJX1Q86VR8 437 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 ZNF595Q8IYB9 648 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 RNF175Q8N4F7 328 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 OR7G3Q8NG95 312 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 ADAMTS18Q8TE60 1221 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 FRMD6Q96NE9 622 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 KCNC2Q96PR1 638 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 MAPKAP1Q9BPZ7 522 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 PNO1Q9NRX1 252 aaKnown RBP11.55□□□□□ -0.56
VEGFA-223ENST00000523125 DCHS2Q6V1P9 2916 aa11.55□□□□□ -0.56
VEGFA-223ENST00000523125 A0A096LPK6 155 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 TRBV11-1A0A0K0K1C0 115 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 CCDC189A1A4V9 331 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 LRRC14BA6NHZ5 514 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 TMEM200CA6NKL6 621 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 RTCAO00442 366 aaKnown RBP11.54□□□□□ -0.56
VEGFA-223ENST00000523125 CLDN4O14493 209 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 PRKNO60260 465 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-223ENST00000523125 NME2P1O60361 137 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 CTNSO60931 367 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 KLHL2O95198 593 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 TGFB1P01137 390 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 EPB42P16452 691 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 NME2P22392 152 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 ATP5A1P25705 553 aaKnown RBP11.54□□□□□ -0.56
VEGFA-223ENST00000523125 DCTP40126 519 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 HLCSP50747 726 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 PER3P56645 1201 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 NAA30Q147X3 362 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-223ENST00000523125 ACAP2Q15057 778 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 FAM83EQ2M2I3 478 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 RNFT1Q5M7Z0 435 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 ZNF787Q6DD87 383 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 SLC25A25Q6KCM7 469 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 MED27Q6P2C8 311 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-223ENST00000523125 CLNKQ7Z7G1 428 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 SIAH3Q8IW03 269 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 PLD6Q8N2A8 252 aaKnown RBP11.54□□□□□ -0.56
VEGFA-223ENST00000523125 TEX9Q8N6V9 391 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 HORMAD2Q8N7B1 307 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 ACOT4Q8N9L9 421 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 TMEM178AQ8NBL3 297 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 THAP3Q8WTV1 239 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-223ENST00000523125 NCLNQ969V3 563 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 TBCDQ9BTW9 1192 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 DEFB126Q9BYW3 111 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 LYRM4Q9HD34 91 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 ADAP2Q9NPF8 381 aa11.54□□□□□ -0.56
VEGFA-223ENST00000523125 MYOCOSA0A1B0GUC4 107 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 SYCE1LA8MT33 242 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 SAP18O00422 153 aaKnown RBP11.53□□□□□ -0.56
VEGFA-223ENST00000523125 SH3BGRLO75368 114 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 SLC25A12O75746 678 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 SCELO95171 688 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 PCNAP12004 261 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 HIST1H1TP22492 207 aaPredicted RBP11.53□□□□□ -0.56
VEGFA-223ENST00000523125 TYK2P29597 1187 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 PHBP35232 272 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 MAGEA12P43365 314 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 CYB561P49447 251 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 SERPINB8P50452 374 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 CLCN2P51788 898 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 ALDH18A1P54886 795 aaKnown RBP11.53□□□□□ -0.56
VEGFA-223ENST00000523125 TGM3Q08188 693 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 PCBP2Q15366 365 aaKnown RBP eCLIP11.53□□□□□ -0.561e-10■■□□□ 11.4
VEGFA-223ENST00000523125 ELAVL1Q15717 326 aaKnown RBP11.53□□□□□ -0.56
VEGFA-223ENST00000523125 UAP1Q16222 522 aaPredicted RBP11.53□□□□□ -0.56
VEGFA-223ENST00000523125 MAPKAPK3Q16644 382 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 PFKFB4Q16877 469 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 TMEM35AQ53FP2 167 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 TECRLQ5HYJ1 363 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 DEPDC1Q5TB30 811 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 KHDRBS2Q5VWX1 349 aaKnown RBP11.53□□□□□ -0.56
VEGFA-223ENST00000523125 GRHL2Q6ISB3 625 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 SRFBP1Q8NEF9 429 aaKnown RBP11.53□□□□□ -0.56
VEGFA-223ENST00000523125 HUS1BQ8NHY5 278 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 PTPMT1Q8WUK0 201 aaPredicted RBP11.53□□□□□ -0.56
VEGFA-223ENST00000523125 SLC44A1Q8WWI5 657 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 UBE2E3Q969T4 207 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 ISL2Q96A47 359 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 CMTM7Q96FZ5 175 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 VMP1Q96GC9 406 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 GPR137Q96N19 417 aa11.53□□□□□ -0.56
VEGFA-223ENST00000523125 SORBS1Q9BX66 1292 aaKnown RBP11.53□□□□□ -0.56
VEGFA-223ENST00000523125 ALOXE3Q9BYJ1 711 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms