RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 NPIPA2E9PIF3 369 aa14.34□□□□□ -0.11
MRPS28-209ENST00000522987 NPIPA3F8WFD2 350 aa14.34□□□□□ -0.11
MRPS28-209ENST00000522987 TAPBPO15533 448 aa14.34□□□□□ -0.11
MRPS28-209ENST00000522987 PHGDHO43175 533 aaKnown RBP14.34□□□□□ -0.11
MRPS28-209ENST00000522987 ZFAND5O76080 213 aa14.34□□□□□ -0.11
MRPS28-209ENST00000522987 TBX6O95947 436 aaPredicted RBP14.34□□□□□ -0.11
MRPS28-209ENST00000522987 SLC6A12P48065 614 aa14.34□□□□□ -0.11
MRPS28-209ENST00000522987 HSPA7P48741 367 aa14.34□□□□□ -0.11
MRPS28-209ENST00000522987 PPIAP62937 165 aaKnown RBP14.34□□□□□ -0.11
MRPS28-209ENST00000522987 POGLUT1Q8NBL1 392 aa14.34□□□□□ -0.11
MRPS28-209ENST00000522987 PSD4Q8NDX1 1056 aa14.34□□□□□ -0.11
MRPS28-209ENST00000522987 ASB15Q8WXK1 588 aa14.34□□□□□ -0.11
MRPS28-209ENST00000522987 F2RL3Q96RI0 385 aa14.34□□□□□ -0.11
MRPS28-209ENST00000522987 OR8D2Q9GZM6 311 aa14.34□□□□□ -0.11
MRPS28-209ENST00000522987 COPS7BQ9H9Q2 264 aaPredicted RBP14.34□□□□□ -0.11
MRPS28-209ENST00000522987 TIMMDC1Q9NPL8 285 aa14.34□□□□□ -0.11
MRPS28-209ENST00000522987 MTO1Q9Y2Z2 717 aaKnown RBP14.34□□□□□ -0.11
MRPS28-209ENST00000522987 USP27XA6NNY8 438 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 RTCAO00442 366 aaKnown RBP14.33□□□□□ -0.12
MRPS28-209ENST00000522987 CLDN4O14493 209 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 LDB3O75112 727 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 TUBB4AP04350 444 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 TNNI3P19429 210 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 GPR143P51810 404 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 SLC12A2P55011 1212 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 LIM2P55344 173 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 NUP107P57740 925 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 CDKL1Q00532 357 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 PMPCAQ10713 525 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 TGFBIQ15582 683 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 EMC4Q5J8M3 183 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 TRIM40Q6P9F5 258 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 ADAMTSL2Q86TH1 951 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 KRT78Q8N1N4 520 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 ARMC10Q8N2F6 343 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 ZFP62Q8NB50 900 aaPredicted RBP14.33□□□□□ -0.12
MRPS28-209ENST00000522987 OR2M7Q8NG81 312 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 OR5M3Q8NGP4 307 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 C16orf52Q8NHV5 167 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 SLCO2A1Q92959 643 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 VPS39Q96JC1 886 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 SPOCK3Q9BQ16 436 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 REXO4Q9GZR2 422 aaKnown RBP14.33□□□□□ -0.12
MRPS28-209ENST00000522987 ENKD1Q9H0I2 346 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 CLK4Q9HAZ1 481 aaKnown RBP14.33□□□□□ -0.12
MRPS28-209ENST00000522987 ADAP2Q9NPF8 381 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 NPDC1Q9NQX5 325 aaPredicted RBP14.33□□□□□ -0.12
MRPS28-209ENST00000522987 PNPLA3Q9NST1 481 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 DNAJC11Q9NVH1 559 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 YARS2Q9Y2Z4 477 aaKnown RBP14.33□□□□□ -0.12
MRPS28-209ENST00000522987 CLCA3PQ9Y6N3 262 aa14.33□□□□□ -0.12
MRPS28-209ENST00000522987 CXorf49A8MYA2 514 aaPredicted RBP14.32□□□□□ -0.12
MRPS28-209ENST00000522987 SAP18O00422 153 aaKnown RBP14.32□□□□□ -0.12
MRPS28-209ENST00000522987 ZNF354AO60765 605 aaPredicted RBP14.32□□□□□ -0.12
MRPS28-209ENST00000522987 SEC31AO94979 1220 aaKnown RBP14.32□□□□□ -0.12
MRPS28-209ENST00000522987 CD22P20273 847 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 HNMTP50135 292 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 HK2P52789 917 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 HSD17B7P56937 341 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 DOC2AQ14183 400 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 OR4D1Q15615 310 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 ZNF585AQ6P3V2 769 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 ABHD17CQ6PCB6 329 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 ZBED8Q8IZ13 594 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 EID3Q8N140 333 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 RNF175Q8N4F7 328 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 OR2L5Q8NG80 312 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 NRGNQ92686 78 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 C14orf79Q96F83 325 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 SEC16BQ96JE7 1060 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 RASL10BQ96S79 203 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 MAPKAP1Q9BPZ7 522 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 NPLQ9BXD5 320 aaPredicted RBP14.32□□□□□ -0.12
MRPS28-209ENST00000522987 ALOXE3Q9BYJ1 711 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 TP63Q9H3D4 680 aaPredicted RBP14.32□□□□□ -0.12
MRPS28-209ENST00000522987 RHOJQ9H4E5 214 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 MCCC2Q9HCC0 563 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 ZNF490Q9ULM2 529 aaPredicted RBP14.32□□□□□ -0.12
MRPS28-209ENST00000522987 MRPS33Q9Y291 106 aaKnown RBP14.32□□□□□ -0.12
MRPS28-209ENST00000522987 SNX24Q9Y343 169 aa14.32□□□□□ -0.12
MRPS28-209ENST00000522987 EFCAB8A8MWE9 144 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 CYR61O00622 381 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 CES2O00748 559 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 TP73O15350 636 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 CCNT2O60583 730 aaKnown RBP14.31□□□□□ -0.12
MRPS28-209ENST00000522987 CLEC3AO75596 197 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 CELA3AP09093 270 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 CCDC166P0CW27 439 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 SSTR1P30872 391 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 DNASE1L1P49184 302 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 MTTPP55157 894 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 STX4Q12846 297 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 TERF2Q15554 542 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 ELAVL1Q15717 326 aaKnown RBP14.31□□□□□ -0.12
MRPS28-209ENST00000522987 TMEM211Q6ICI0 200 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 ARHGAP11AQ6P4F7 1023 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 HSDL2Q6YN16 418 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 ZNF793Q6ZN11 406 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 GPSM1Q86YR5 675 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 OR4N5Q8IXE1 308 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms